Pseudomonas aeruginosa PAO1-VE13: N297_4426
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Entry
N297_4426 CDS
T03097
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N297_4426 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paev03400
]
N297_4426 (recC)
Enzymes [BR:
paev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N297_4426 (recC)
DNA repair and recombination proteins [BR:
paev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N297_4426 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGY69322
LinkDB
All DBs
Position
complement(4805190..4808705)
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AA seq
1171 aa
AA seq
DB search
MPEPLGTTALTPGFMIVHGNRLDDLRDLAVSWMRRYPLAPLESERVLVHSNGIAQWLKLA
LAEDPREDGGGGGGIAAALEVQLPAQFLWQAYRAVLGRESIPEVSELDKAPLTWRLMRLL
PGLLERPEFRTLQRFLADDADLRKRHQLAERLADLFDQYQVYRGDWLDDWSQGRDQLRTA
NGQARPLGADERWQAELWRALLADVGADSLARSRSGVHRRFIEALRSASAAPRALPRRVV
VFGISSMPAQTLEALAALARFSQVLLCVHNPCRHHWADIVADKDLLRHEYRRQQRRAGVP
ADLDEDRQHQHAQPLLAAWGKQGRDYINLLDSYDDPDSYRNLFGEVNGGRIDLFSEETPH
GLLGQLQDDILELRPLAETREHWPPVAPRSDASIRFHVAHSAQREVEILHDQLLARFNAD
PSLKPRDVIVMVPDINAYAPHIEAVFGQVPRDDQRFIPYTLADQGQRGREPLLIALEHLL
KLPDSRFAVSEILDLLDVPALRRRFGVDEADLATLHRWIEGAGVRWGLDAAQRERLGLPA
GLEGNSWRFGLRRMLLGYAVGEGAALQGIQPYDEVGGLDAALAGPLAVLLERLEVAYAEL
AEPATPAQWGERLQALLTVFFEAHDERDELLLTQLLQLLERWQEHCACAAFAEPLPISVI
REAWLGGLDQGGLNQRFLAGAVSFCTLMPMRAIPFRLVCLLGMNDGDYPRQQSPLDFDLM
RNDYRPGDRSRREDDRYLLLEALLSAREQLYVSWVGRSIRDNGERPPSVLIGQLRDHLAA
GWRLDPDGDGEALLRALTQEHPLQPFSRRYFHDAPEQGVDGLFTYAREWREVHREDEIGV
PDAEAPLPPLELEGALGLRALAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALD
NWKLQFELTERMKRWVERDWDAEGLPVQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLP
DLLWRYRQEIERWPEAVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHE
GRSFKWHSLVRHWLQHLALQRLGQPVSSVLVSQTGTLEIPPLPSERASEYLDQLIDAWRQ
GMRQPLPLACRTAFAWLASGGAAEPEKAMREARKRYEGGFGMGGEVDASPALARVYPDFD
RLLASGEFAHWAEQLYAPLLAALGRGAEEQA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccttgggaaccaccgctctcacgcccggattcatgatcgtccacggcaat
cgcctggacgacctgcgcgacctcgccgtttcctggatgcgccgctatccgctggcgccg
ctggaaagcgagcgggtcctggtgcacagcaacggcatcgcccaatggttgaagctggca
ttggccgaagatccccgcgaggacggcggcggcggtggcggcatcgccgcggcgctggag
gtgcagttgccggcgcagttcctctggcaggcctatcgcgcggtgctgggccgcgaaagc
attcccgaggtttccgaactggacaaggcgccgctgacctggcgcctgatgcgtctgctt
cccggattgctggagcgtcccgagttccgcaccctgcaacgtttcctcgccgacgatgcc
gacctgcgcaagcgtcatcaactggccgagcgcctggccgacctgttcgaccagtaccag
gtctatcgcggcgactggctcgacgactggagccagggccgcgaccagttgcgcacggcg
aacgggcaggcgcgcccgctcggtgccgacgagcgctggcaggccgaattgtggcgcgcg
ctgctcgccgacgtcggtgccgatagcctggcccgcagccgctccggcgtgcaccggcgc
ttcatcgaggcgctgcgctccgccagcgcggcgccgcgcgcgttgccgcgacgagtggtg
gtgttcgggatttcctcgatgccggcgcagaccctcgaggcgctggccgccctggccagg
ttcagccaggtgctgctctgcgtgcacaacccctgtcgccaccactgggccgacatcgtc
gccgacaaggacctgttgcgccacgagtaccgccgccagcagcgccgcgccggcgtcccc
gccgacctcgacgaggaccgccagcaccagcatgcccagccgttgctggcggcctggggc
aagcagggccgcgactacatcaacctgctcgacagctacgacgacccggacagctatcgg
aacctgttcggcgaggtcaacggcgggcgcatcgacctgttcagcgaggagaccccgcac
gggctgctcggccagttgcaggacgatatcctcgaactgcgcccgttggcggaaacccgc
gagcactggccgccggtggcgccgcggagcgacgcctcgatccgcttccatgtggcccac
agcgcgcagcgcgaagtggagatcctccacgaccagttgctcgcccgcttcaacgccgat
ccgagcctgaagccgcgcgacgtgatcgtcatggtccccgacatcaacgcctacgcgccg
cacatcgaggcggtgttcggccaggtgccgcgcgacgaccagcgcttcattccctatacc
ctggccgaccagggacagcgcggtcgcgagccgctgctgatcgccctggagcatctgctg
aaactgcccgacagccgtttcgccgtgagcgagatcctcgacctgctggacgtcccggca
ttgcgccggcgtttcggcgtcgacgaggccgacctggcgaccctgcaccgctggatcgaa
ggcgccggcgtgcgctgggggctggatgccgcgcagcgcgagcgtctcggcctgccagcg
ggactggagggcaacagttggcgcttcggtctgcggcgcatgctgctcggctacgcggtc
ggcgaaggcgcggccctgcaaggcatccagccctacgatgaggtcggtggtctggacgcc
gccctggcaggcccgctggctgtgctgctggagcgcctcgaggtggcctacgccgagctg
gccgaaccggccaccccggcgcagtggggcgagcgcctgcaagccctgctcacggtgttc
ttcgaggcccacgacgagcgcgacgaactgcttctcacccagctcctgcaattgctcgag
cgctggcaggaacactgcgcttgtgcggccttcgccgagccgctaccgatcagcgtgata
cgcgaggcctggctcggcggcctggaccagggcggcctgaaccagcgcttcctggctggc
gcggtgagtttctgcacgttgatgccgatgcgcgcgatcccgttccggctggtctgcctg
cttggcatgaacgatggcgactacccccgccagcagtcgccgctggatttcgacctgatg
cgcaacgactaccgccccggcgaccgctcgcggcgcgaggacgaccgctacctgctgctc
gaggcgctgctctcggcgcgcgagcaactctacgtgagctgggtggggcggagtatccgc
gacaatggcgagcggccgccctcggtgctgatcggccagttgcgcgatcacctggcggcc
ggctggcgcctggatccggacggcgacggcgaggcgctgctgcgtgccctgacccaggag
catccgctgcagccgttcagccgccggtattttcacgatgcgccggagcagggcgtcgat
ggcctgttcacctacgcccgcgagtggcgcgaggtccatcgcgaggacgagatcggcgtt
cccgacgccgaagcgcccctgccgccgctggagctggagggcgcgctggggctgcgagcg
ctggcggagttcctcgccaacccggtgaatgcgttcttccagcagcggctcaaggtgcgt
ttcgacgacgagcaattgaccggcaacgacgaagagcctttcgaactggacgcgctggac
aactggaagctgcaattcgagctgaccgaacgcatgaagcgctgggtcgagcgggactgg
gatgccgagggcctgccggtgcagttgcaggcccaggtcgagcgactgcggcgacagggt
cgcctgccgctggcggcgttcggcgagttctccgcgcgccatttgctgcaaccgctgccc
gacctgctctggcgctaccgccaggaaatcgagcgctggccggaggcggtcgagcagcag
caggagttgcgccatcgccatccgtccgggctggagctggaggactggctcggcggcttg
cgtcgcgacgcttccgggcgcctggcgcgcctgcaattgctcagcggcaagctccatgag
gggcgcagcttcaagtggcacagcctggtacgccactggttgcagcacctcgccctgcaa
cgtctaggccagccggtgagcagcgtgctggtgagccagaccggcaccctggagattccg
ccgttgccgagcgagcgtgccagcgagtacctcgaccagttgatcgacgcctggcgccag
ggcatgcgccagccgttgccgctggcctgccggaccgctttcgcctggctcgccagtggt
ggcgccgcagagcccgagaaagccatgcgcgaggcgcgcaagcgctacgagggagggttc
ggcatggggggcgaggtggacgcctcgccggcgctggctcgggtctatccggacttcgac
cggctgctcgccagcggtgagttcgcgcactgggccgagcagctctacgcgccgctgctg
gctgccctgggacgtggcgcggaggagcaggcatga
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