Pseudomonas aeruginosa PAO1-VE13: N297_4748
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Entry
N297_4748 CDS
T03097
Name
(GenBank) winged helix-turn-helix DNA-binding family protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Module
paev_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paev03000
]
N297_4748
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
paev01504
]
N297_4748
Transcription factors [BR:
paev03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
N297_4748
Antimicrobial resistance genes [BR:
paev01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
N297_4748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
TetR_N
HTH_AsnC-type
TetR_C_29
MarR_2
MerR
HTH_11
Xre-like-HTH
HTH_Crp_2
HTH_6
LacI
UPF0175
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
AGY70404
LinkDB
All DBs
Position
5148942..5149577
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AA seq
211 aa
AA seq
DB search
MTLAPRSAQLPDSPHRDSLDPAPTPSSQDQRLLKALATAMVNHPRATMGELAELAGVSRA
TLNRHCGTREGLKRRLESHARSTLERLTHSAALQRLEPREALRELIREHLAQRDLLALLM
FEQNPGRQAGHGDASWQSYVEALDAFFLRGQQKRVFRIDISAATFSELFIVLIYGMVDAE
RRGRAASAGLSATLEELFLRGASNPAQPASP
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgctcccagatccgcccagctacccgactccccgcacagggacagtctcgac
ccagcgccaaccccgtcgtctcaggaccagcgcctgctcaaggccctggccaccgcgatg
gtcaatcatccgcgcgccaccatgggagaactggcggaactggcaggagtgagcagggca
accctgaaccgtcattgcggtacccgcgaaggtctcaagcggcgcctggaaagccatgcc
aggagtaccctcgaacgcctcacccacagcgccgccctgcagcggctggagccgcgggaa
gcgctacgcgagctgatccgggaacacctcgcccagcgcgacctgctggcgctgctgatg
ttcgagcagaacccgggacgccaggccgggcatggggacgccagttggcagtcctatgtc
gaagccctggacgccttcttcctgcgcggccagcagaagcgtgtgttccgtatcgatatc
agcgcggcgaccttcagcgaactcttcatcgtcctgatctacggcatggtcgatgccgag
cgccgcggtcgcgcggccagcgccgggttgtccgccacgctggaggagctgttcctgcgt
ggcgcgtcgaaccccgcacaacctgccagcccttga
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