Pseudomonas aeruginosa PAO1-VE13: N297_4752
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Entry
N297_4752 CDS
T03097
Name
(GenBank) iclR helix-turn-helix domain protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Module
paev_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paev03000
]
N297_4752
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
paev01504
]
N297_4752
Transcription factors [BR:
paev03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
N297_4752
Antimicrobial resistance genes [BR:
paev01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
N297_4752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
HTH_31
TetR_N
HTH_AsnC-type
HTH_24
LacI
HTH_6
HTH_10
SpoIIID
Xre-like-HTH
MarR_2
HTH_26
HTH_11
HTH_20
TetR_C_29
HTH_3
MerR
DUF6066
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AGY73506
LinkDB
All DBs
Position
5155556..5156119
Genome browser
AA seq
187 aa
AA seq
DB search
MTLISHDERLIKALAVAIVDRPRATLKELAEAAGVSKATLHRFCGTRDNLVQMLEDHGET
VLNQIIQACDLEHAEPLEALQRLIKEHLTHRELLVFLVFQYRPDFLDPHGEGARWQSYLE
ALDAFFLRGQQKGVFRIDITAAVFTELFITLVYGMVDAERRGRAASSNSAHTLEQMFLHG
ASNPARS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatttcccatgacgagcgactcatcaaggcgctggcagtcgctatcgtcgac
cgcccgcgagcgacgctgaaggaactggccgaggcggccggcgtaagcaaggccaccctg
caccgcttctgcggcacgcgggacaacctggtgcagatgctcgaggaccacggagagacc
gtactgaaccagatcatccaggcctgcgacctggagcatgccgagcctctggaggcgttg
cagcgcctgatcaaggaacacctcacccaccgcgagctgctggtattcctggtattccag
taccgcccggacttcctcgacccgcacggcgaaggcgcacgctggcagtcctacctggaa
gcgctggacgccttcttcctgcgcggacagcagaaaggcgtgtttcgcatcgacatcacg
gcggccgtgttcaccgaactgttcatcaccctggtctacggcatggtcgatgcggaacgt
cgcggacgggcggccagctccaattccgcgcataccctggagcagatgttcctccatggc
gcctccaatccggctcgctcctga
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