Pseudomonas aeruginosa PAO1-VE13: N297_5123
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Entry
N297_5123 CDS
T03097
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
paev
Pseudomonas aeruginosa PAO1-VE13
Pathway
paev03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paev00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
N297_5123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paev03019
]
N297_5123
03009 Ribosome biogenesis [BR:
paev03009
]
N297_5123
Messenger RNA biogenesis [BR:
paev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N297_5123
Ribosome biogenesis [BR:
paev03009
]
Eukaryotic type
Pre-60S particles
RNases
N297_5123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGY69280
LinkDB
All DBs
Position
complement(5556276..5556818)
Genome browser
AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEILAGMDEW
NTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMP
RLEGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgcagaaccttatctggatcgacctggagatgaccggcctcgatccggac
cgggacgtcatcatcgagatggccaccatcgtcaccgacagtgacctcaacaccctggcc
gaaggaccggtgatcgccatccaccagccagaggaaatcctcgccggcatggacgagtgg
aatacccgccagcacggccagtccggcctgacccagagggttcgggaaagtaccgtgagc
atggccgaggccgaggcgcagaccctggccttcctcgagcagtgggtgcccaagcgcagc
tctccgatctgcggcaacagcatctgccaggaccgccgcttcctctataggcacatgccc
aggctggaaggctacttccactaccgcaacctcgacgtctccaccctcaaggagctggcc
gcgcgctgggcgccgcaggtccgcgagagcttcaagaagggcaacacccacctggcgctg
gacgatatccgcgagtcgatcgccgagctgcgccactaccgcgaccacttcatcaagctc
tga
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