Paraneptunicella aestuarii: KIH87_00060
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Entry
KIH87_00060 CDS
T07748
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paew
Paraneptunicella aestuarii
Pathway
paew03030
DNA replication
paew03410
Base excision repair
paew03420
Nucleotide excision repair
paew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIH87_00060 (polA)
03410 Base excision repair
KIH87_00060 (polA)
03420 Nucleotide excision repair
KIH87_00060 (polA)
03440 Homologous recombination
KIH87_00060 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paew03032
]
KIH87_00060 (polA)
03400 DNA repair and recombination proteins [BR:
paew03400
]
KIH87_00060 (polA)
Enzymes [BR:
paew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIH87_00060 (polA)
DNA replication proteins [BR:
paew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KIH87_00060 (polA)
DNA repair and recombination proteins [BR:
paew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KIH87_00060 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIH87_00060 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
K-box
Motif
Other DBs
NCBI-ProteinID:
UAA38812
LinkDB
All DBs
Position
complement(13429..16248)
Genome browser
AA seq
939 aa
AA seq
DB search
MNTNNNTPLVLVDGSSYLFRAFHGLPPLTNSKGMATGAVYGVINMLRSLIKQYQPHQIGV
IFDAKGKTFRDDIYPEYKAHRPPMPDELREQIEPLHKIIKAMGLPLIVEPGVEADDVIGT
LSTHASKLGRNTVISTGDKDMAQLVNEHVTLVNTMTNTTMDREGVVEKFGIPPELIIDFL
ALKGDKVDNIPGVPGVGDKSALALLQGIGSIKDIYNNLDKIAGLDFRGSKTMALKMQEYE
EQARLSYELATIKLDVELDFDIDSLNIADPDNAALLELFEELEFKRWLNDIDGFNEGHKT
GTTSASAITSSDLKEQKQASPESALESAREVKPSQIEIHYETIFDKAALDNWLDKIKQAK
LFAFDTETTSINYMEAELVGFSFAIKEGEAAYLPFGHDYPDAPDQLNRDEVLTIFKPILE
DPQIKKIGQHLKYDKNVLARAGIELKGIAFDTMLESYVFNSTLGRHDMDSMAERFLAHKT
THFEDIAGKGVKQLTFNQIDIEDASHYAAEDADITLRLHNHLWPQLEEIPSLKSLLTEIE
IPLASVLSKMERTGVYIDSQKLREQSNQLAQKIMDLEKQVHEMAGEKFNLGSTKQLQHIL
YEKMGLPILKKTPKGAPSTSEEVLQDLALDYELPELLMTYRGLTKLKNTYTDKLPTMVDP
RTNRVHTSYHQAVAATGRLSSTDPNLQNIPIRTEEGRKVRQAFIAPEGYTIVAADYSQIE
LRIMAHLSDDKGLLDAFSHGQDIHKATAAEVFGVPLDEVTSDQRRSAKAINFGLIYGMSA
FGLAKQLHIGRNEAQKYMDLYFERYPGVLDYMEVTRTNAKEQGYVETVFGRRLYLPDIRS
SNGARRKGAERAAINAPMQGTAADIIKKAMLAVHQWIEQQEPGCIQMLMQVHDELVFEIK
DQFVEEYKTKIVELMQNAVELKVPLLVEAGVGQNWDEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaataacaatactcctctcgttttagtagatggatcttcctatctgtttcgc
gcttttcatggccttccgccactcacaaattcaaaaggaatggcaacaggtgctgtttat
ggcgttatcaatatgttgcgcagtctgatcaaacaatatcagccacatcagattggagtc
atttttgatgccaagggcaaaacatttcgtgacgacatttatccggaatacaaagcgcac
cgcccgccaatgcccgatgagctgagagaacaaatagagcctctacacaagatcattaaa
gcaatgggcttacctttaatagttgagcccggcgttgaagctgatgatgttatagggacg
ctttccactcatgcttcaaaattaggccgtaatacagttatcagcactggcgacaaagat
atggcgcagttggttaacgagcatgttacgctggttaacacaatgaccaatacaaccatg
gacagagaaggcgttgttgaaaagtttggcattcctcccgaattaatcatcgactttctg
gcattgaaaggcgacaaagtcgacaacataccaggcgtacccggggttggtgataagagc
gccctagccctgcttcaaggtattggtagcatcaaggatatttataataatctggataaa
atcgcgggattggattttcgaggctcaaaaaccatggccttgaaaatgcaggaatatgaa
gaacaagctcgcttatcttacgagttggcaactatcaagttagatgtcgagttggatttc
gatatagactctctcaatattgccgatccagacaatgcggctttgttggaattgtttgaa
gaattggagttcaagcgctggttaaatgatattgatggatttaatgaaggtcataaaacg
ggaaccacttcagcttcagctatcacttcatcagatctgaaagaacaaaagcaagcctct
ccagaatcggctctagaatcagcccgagaagtaaagccaagccaaattgaaattcactac
gagacgattttcgacaaagcagcattagacaactggctggataaaattaagcaggccaaa
ttgtttgctttcgatacggaaacaacaagtattaactacatggaagcagagctagtcggc
ttttcatttgccataaaagaaggtgaagccgcctacctgccttttggtcacgactatcca
gacgcaccagatcaattaaaccgagacgaagttctgacgatctttaaaccaattcttgaa
gatcctcagattaaaaaaattgggcaacacctgaaatacgataaaaacgttctggctcgc
gcgggtattgagttaaaaggcattgccttcgataccatgttggagtcttacgtatttaac
agcactttgggacgtcacgacatggacagtatggctgagcgttttctggctcataaaaca
acgcatttcgaagatatcgcaggcaaaggcgttaagcagcttacttttaaccagatagat
atcgaggatgcttcccattacgcagccgaagatgccgacatcacactgcgactacataat
catttgtggccacagttagaagaaattccttctttaaagtctctactaaccgaaatagaa
attcctctggcatcagtattatccaaaatggaacgcactggcgtttatatcgatagccaa
aagctgagggaacaaagcaatcagctagctcagaaaattatggatctggaaaaacaggtt
cacgaaatggctggggaaaaattcaatttaggctcaaccaagcaactccagcatattctg
tatgaaaagatggggcttcctattttgaagaagacgccaaaaggtgcgccttcaacctca
gaggaagtgttacaggatctggcgttagattatgagcttcccgaactgcttatgacctat
cgcggcttaaccaaattaaagaatacttatactgataagttgccgaccatggttgacccg
cgcactaatcgcgtacacaccagttatcatcaagcagtagcggcaacgggtcgtttgtct
tcaactgatcctaacttgcaaaatattcctatcagaacagaagaaggtagaaaagtacgt
caagccttcatcgcaccagagggttacaccatagtcgctgccgactattctcaaatagaa
ctgcgcattatggctcatttatcagatgacaaagggcttcttgatgctttctctcatggt
caggatattcataaagccacagccgctgaagtatttggtgtaccactagatgaagttacc
agtgaccaacgccgtagcgctaaagccattaatttcggcctcatttatggcatgtccgcc
tttggccttgccaagcagctacatattggtcgcaacgaagcacaaaaatatatggatcta
tattttgagcgctaccctggtgtactggattatatggaagtgactcgaaccaatgccaaa
gagcaaggctacgttgaaacggtatttggacgccgcttgtacttgcctgacattcgctca
agcaatggagcaaggcgtaaaggggcagaacgagcagccattaatgcaccaatgcagggc
acggccgccgatatcatcaagaaagccatgttggcggtacatcaatggatagaacagcaa
gagccaggttgcattcaaatgctcatgcaggtacacgatgaattggtattcgaaataaaa
gaccaattcgtcgaagagtacaaaaccaaaattgttgaactgatgcaaaatgccgttgaa
ctcaaagttccactgctcgtagaagccggagttggacaaaattgggatgaagcgcattaa
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