Paraneptunicella aestuarii: KIH87_01170
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Entry
KIH87_01170 CDS
T07748
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
paew
Paraneptunicella aestuarii
Pathway
paew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIH87_01170 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paew03019
]
KIH87_01170 (rhlB)
Enzymes [BR:
paew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KIH87_01170 (rhlB)
Messenger RNA biogenesis [BR:
paew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIH87_01170 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UAA39011
LinkDB
All DBs
Position
complement(270706..271956)
Genome browser
AA seq
416 aa
AA seq
DB search
MQTTHLTETHFSELGLDESVLSALKAGSFEHCTPIQALSLPPSLSGQDVAGQAQTGTGKT
IAFLVATFHHLLKSPKPDHGQPRAIIMAPTRELAVQIHKDATLLSKFTGISLGLIYGGEG
YQSQKESLEAGVDIIIGTTGRILDYYKQGTFSLGHIEVAVLDEADRMFDLGFIKDIRFLF
RRMPPPTERLSMLFSATLSFRVQELAYEHMNHPVHVQVDPEQMTASRVKEELFYPSDEDK
MMLLLTLLEEEWPEKAIIFANTKHSCENINDWLVADGHRVGLLSGDVPQKKRLSILDRFS
KGQLDFLVATDVAARGLHIDKVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHAISFACEK
YALNLPAIEEYIQHTIPVTEYNPNELLTDVPKPHRHQKRRVSRDKRNNKIRQSKRH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacacatttaacagaaacacacttttccgaattaggattagacgaaagcgta
ctaagcgctttaaaagcgggtagctttgaacattgtacgccaatacaggcgctttcattg
ccaccgtctttaagtggacaagacgttgccggccaagcccaaacgggtacaggcaaaacc
atcgccttccttgttgccacctttcatcacctcctaaaaagtccaaaaccagaccacggt
caaccccgagccatcatcatggcaccaacccgtgaattagcagttcaaatccataaagat
gccactctattaagtaaattcaccggcattagcctgggattaatttacggtggagaaggt
tatcaaagccaaaaagaatcactggaagccggtgttgatatcattattggcacaaccgga
cgcatccttgattactataagcaaggtacgttttcgctaggacatatagaagtagcagta
ttagatgaagccgatcgcatgtttgatctgggctttatcaaagacattcgctttttattc
cgcagaatgcctccaccaaccgaacgcttgagcatgttattttcagcgacgctgtctttc
cgagttcaggaattagcctatgaacatatgaaccaccctgttcatgttcaggttgaccca
gagcaaatgaccgcaagccgagtcaaggaagagctgttttatccttccgatgaagacaag
atgatgctgcttctaaccttgctggaagaagagtggccagaaaaagccattatcttcgcc
aataccaagcatagttgtgaaaatatcaatgactggctggttgccgatggtcaccgcgtt
ggcttgctaagtggcgatgtacctcagaagaagcgcttgagtattctggatcgattctcc
aaaggacaactggattttctggtcgcaaccgacgttgccgcccgagggcttcacattgat
aaagtcacccacgtattcaactacgacctgcctgacgacgccgaagattatgtacatcga
ataggtcgtaccggacgtgctggtaaaagcggacacgccatcagttttgcttgtgaaaaa
tatgccttgaatttacctgccattgaggaatatattcaacatactatccccgtaactgag
tacaaccctaacgagttactcactgatgtgcccaagcctcaccgccatcaaaaaagacgg
gttagcagagataaacgtaacaacaaaatcaggcaatccaaacgacattaa
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