Paraneptunicella aestuarii: KIH87_04335
Help
Entry
KIH87_04335 CDS
T07748
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paew
Paraneptunicella aestuarii
Pathway
paew03410
Base excision repair
paew03430
Mismatch repair
paew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KIH87_04335 (recJ)
03430 Mismatch repair
KIH87_04335 (recJ)
03440 Homologous recombination
KIH87_04335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paew03400
]
KIH87_04335 (recJ)
DNA repair and recombination proteins [BR:
paew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KIH87_04335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KIH87_04335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KIH87_04335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UAA39593
LinkDB
All DBs
Position
1034910..1036625
Genome browser
AA seq
571 aa
AA seq
DB search
MNIQQRPSVTTDGLSSDLHPVIQQIYARRGALTDADVQRTTSHLQHYQGLKGISEAVAIL
ASAMAEQKHIMVVGDFDADGATSTALVIRALNQLGNKKHSYLVPNRFEFGYGLSPEIVTM
AYEQGAELIITVDNGISCIEGVALAKQKGMSVVITDHHLPAEQLPNADAIVNPNQSGCEF
ASKNLAGVGVAFYLMMALLRHLQQSNWFAERQISPPNLTNLLDLVALGTVADVVKLDGNN
RILVHQGIQRIRAGQCCAGINAMLQVAKRTNSDIDASTMGFVLGPRLNAAGRLDDMSLGI
QCLLTDDEYTAIHLASRLDSLNSERREIESSMQKDADAFLAQFALGNDTMPSGIVLYEET
WHQGIIGILAGRVKDKYNRPTVAMAWQDETTLKGSARSIPGVHIRDLLDELYNRYPGIIQ
KFGGHAAAAGLTINADKLAAFIKVFDQLCEEFLEGMELQDVILSDGQLQKECFNLPFAQQ
LKAAGPWGQGFPEPVFDGEFHIVQQRLVGAKHLKLVLRSEQGEVVDGIMFNVDLDVWPNE
AQKAQVAYKLDINRFRNNVSLQLMIEAIEPV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattcaacaacgcccgtctgttacgacagatgggctttcttctgatttacaccct
gtcattcaacaaatctatgcccgtcgaggagcattaactgacgctgatgtgcagcgaact
acttctcatttacagcattatcaaggcttgaaaggtatttccgaagcagtggctattttg
gcgtcggccatggctgagcagaagcatattatggtggtgggtgatttcgacgccgatggc
gcaacaagcactgctctggtcattcgtgctcttaatcaattaggcaataaaaagcacagt
tatttggtgccgaaccgatttgaatttggttatggtctgagccctgaaattgtcaccatg
gcgtatgagcagggcgcagagctaattatcacagtagataacggcattagctgtattgaa
ggtgtggcgttggcaaaacagaagggaatgtcggtagtgatcaccgatcaccatttaccc
gctgagcagctacccaatgctgatgccatagttaaccccaatcaatccggttgcgagttt
gcctctaaaaaccttgccggagtgggcgttgctttttatctcatgatggcattgcttcga
catttgcagcagtcgaactggtttgccgagcggcaaataagcccgcctaatctaactaat
ctgctggatttagtggctttgggtacggttgctgacgtagtgaaactggacggcaataat
cgcattttggtacatcagggcattcaacgtattcgagccgggcaatgttgcgcggggatt
aatgccatgttgcaagttgccaagcggactaactccgatatcgacgcttcgacaatgggc
tttgtgttaggccctcgactcaacgccgctgggcgcttggatgatatgtctttgggcatc
cagtgtttgcttaccgatgacgagtacacggcgattcatttagccagccgtttggatagt
ttgaacagtgaacgccgtgaaattgaatccagtatgcaaaaagatgcagacgcatttttg
gcgcagtttgctttaggcaatgacaccatgccaagtggcattgtgctttatgaagaaacc
tggcaccagggtattattggtattctagccgggcgtgttaaagacaagtacaaccgacca
actgtggcaatggcgtggcaagacgaaaccaccttaaaaggctctgctcgctctattccc
ggtgtacatattcgtgatctgctggacgaactctataatcgctaccccggcattattcag
aaattcggtggtcatgccgctgccgctggtttaaccattaatgcagataaactggcggca
tttattaaagtcttcgaccagttatgtgaagaatttcttgaaggcatggaattgcaggat
gtgattttaagtgacggccagctacagaaagaatgctttaatttaccctttgctcagcaa
ctaaaggccgcaggcccttggggacaaggttttcctgaacctgtattcgatggtgagttt
cacattgtgcagcagcgactggtgggagccaaacacttaaagctggtactgcgtagcgaa
cagggcgaggttgttgacggtattatgtttaatgttgatttggacgtatggcctaacgaa
gctcagaaagcacaagtggcttacaagctggatatcaatcgcttccgcaataacgtttct
ttgcaattgatgattgaggcaatcgagcctgtttag
DBGET
integrated database retrieval system
