Paraneptunicella aestuarii: KIH87_05005
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Entry
KIH87_05005 CDS
T07748
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paew
Paraneptunicella aestuarii
Pathway
paew03030
DNA replication
paew03430
Mismatch repair
paew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIH87_05005 (dnaE)
03430 Mismatch repair
KIH87_05005 (dnaE)
03440 Homologous recombination
KIH87_05005 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paew03032
]
KIH87_05005 (dnaE)
03400 DNA repair and recombination proteins [BR:
paew03400
]
KIH87_05005 (dnaE)
Enzymes [BR:
paew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIH87_05005 (dnaE)
DNA replication proteins [BR:
paew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIH87_05005 (dnaE)
DNA repair and recombination proteins [BR:
paew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIH87_05005 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UAA39720
LinkDB
All DBs
Position
1188330..1191800
Genome browser
AA seq
1156 aa
AA seq
DB search
MHNVEFVHLRVHSDFSMCDGLNKVKPILAKAKSLNMPAIAITDQMNMCGLVKYYGAAHGM
GLKPIIGADFWVQDPALPDENLTRLTLLAQNNDGYKNITLLISKAYQRGNINERAVIDVD
WLIEHNDGVIVLSGAKDGDLGVALRKGNMAQSATITQFYKTHFPDRYYVELHRTGRAGEE
DYLHAAVEWAAENDLPVVATNEVCFNNQEDFEAHEIRVCIHDGYTLDDTRRPKLYSEQQY
MRSPEEMAELFSDIPEAIANTVEIAKRCNVTVLLGEYFLPKCPTGDLTEEDFLVKKSQEG
LEERLEFLFPNPEVRAKKRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDHGIPVG
PGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVA
DLYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDKISKLIPGDPGMTLAKAFEVEP
RLPEVYEQDEEVRDLIDMARTLEGVVRNAGKHAGGVVIAPTKITDFSPLYCDDQGKNPVT
QFDKNDVETAGLVKFDFLGLRTLTIIQWALDMILEGRGKEIDISAIPLDDKESFGMLQRA
ETTAVFQLESRGMKDLVKRLRPDNFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISY
PDAQYQHECLQEILQPTYGIILYQEQVMQIAQVMAGYSLGGADLLRRAMGKKKPEEMAKQ
RAVFQEGSQNNNIDPELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFM
AAVMSADMDNTDKIVTLVDECQRMGLEVLPPDLNTGKYKFSVNDDGQIVYGIGAIKGVGE
GPIEAIIHARETHGFFTDLFDFCGKVELKRVNKRVLEKLVLAGAMDNLGPHRAALMATLP
DALAAAEQHRKAESCGQSDMFGLMTNEPEDVSATFVDVPEWPEKQWLDGEKETLGLYLTG
HPINQYRDEIKHYCSGRLVDLKPTARDGNITAVGLVLSVRVLVNKKGRRWAIVTLDDKSA
RVDARFFPDDFEKYEEILQTDKVLVVSGSVSFDDFSGGHTITVREAMDNIKAREKYLKRI
QLTLDDAWIEPGNIQKLQAIMQNYRNGACPVSIKYMHEDAEAVLNVGAMWYLVPEDQLLH
ELKQLLSPEQVSLKFH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgtcgagttcgtgcatttacgtgttcacagtgatttttccatgtgcgatggc
ctgaataaggtcaagccgatactggcaaaagccaaatcattgaacatgcccgccattgct
attactgaccagatgaatatgtgtggtctggtgaagtattacggtgccgcacatggcatg
ggattaaagccaattattggcgcggatttttgggtgcaagacccggcgttgcccgatgaa
aacctgacgcgcttgacgttattggcacagaataatgacggttacaaaaacatcaccttg
ttgatttcaaaagcttatcaacgcggcaacatcaatgaacgagccgtgattgatgttgat
tggcttattgaacataacgacggtgttattgttctctctggagccaaagacggtgatttg
ggcgtcgccttacgtaaaggcaatatggcgcaatcggccactattactcagttttataaa
actcattttcctgatcgttattacgttgagttgcaccgtactggtcgtgcgggtgaagaa
gattatcttcatgccgcagtagagtgggctgctgaaaatgatttacctgtggttgcgacc
aatgaagtgtgttttaacaaccaggaagatttcgaagctcatgaaattcgtgtctgtatc
cacgacggctataccctggacgatactcgacgtcccaagttgtattcagaacagcaatac
atgcgcagcccggaagaaatggccgagctgttctcagatattcctgaagccattgccaat
acggttgaaattgccaagcgctgtaatgtaacggtattgctaggggaatacttcctgcct
aaatgcccaaccggagatctgaccgaagaagactttctggtcaagaaatctcaggaaggt
ttggaagagcgattggagttcttgttcccgaatccggaagtgcgcgccaaaaaacgacct
gaatatgatgagcgtttagatattgagcttaaagtaattaaccagatgggattccccggt
tacttcctgatcgttatggagtttattcagtggagtaaggatcacggcattccggttggc
cctgggcgtggttcgggtgcgggttctttagtggcgtatgcattaaaaattactgatttg
gatccgctggaattcgatctgctattcgaacgattcttgaaccctgagcgggtttccatg
cccgacttcgacgtcgatttttgtatggatcgtcgcgatgaagttatcgatcacgttgcc
gatttgtatgggcgtgatgcggtatctcagatcattacttttggaaccatggctgccaag
gcggtagtgcgagatgttggccgggttttgggtcatccctatggtttcgttgataagatt
tccaaactgatcccgggtgatccgggtatgactctggcaaaggcatttgaagttgagccg
cgtttacccgaagtgtatgagcaggacgaagaagtccgtgacctgattgatatggcacgc
acactcgaaggtgtggtacgtaacgcaggtaaacacgccgggggcgtggttattgcgcca
accaagatcactgacttctcgcctttgtattgtgatgatcagggtaaaaacccggtgaca
caattcgataagaacgacgttgaaaccgccggcttggtaaagttcgacttcttgggatta
cgcacattgaccattatccagtgggcattggacatgatcctggaagggcgtggtaaagag
atcgatatttccgccattccattggacgacaaagaaagctttggcatgttacagcgtgct
gaaacaaccgcggtattccagttggaatctcgcggtatgaaagatctggttaagcgtctg
cgtccggataattttgaagatattatcgctttggtggccttgttccgaccggggccattg
cagtcgggcatggtagataacttcatcgaccgtaagcatggtcgtgaggcgatttcctat
ccggatgcccagtatcagcacgagtgcttgcaagaaattttgcagcccacttacggcatc
atcctgtatcaagagcaggttatgcagattgcccaggtcatggcgggttacagcctcggc
ggcgccgacttgctgcgccgagccatgggtaagaaaaagccggaagagatggcaaaacaa
cgggctgtctttcaggaaggttcgcagaataacaacatcgaccccgaattggcgatgaag
atcttcgacctggtagagaagttcgcgggatacgggtttaacaaatctcactctgcagct
tatgccctggtttcctatcaaacattgtggttaaaggcacattatccggctgagtttatg
gctgcggtaatgtctgctgatatggataacactgacaaaatcgttactttggttgatgaa
tgccagcgtatgggactggaagtgttaccgcctgatttgaataccggtaaatacaagttt
tcggtgaatgatgacggccagattgtttatggaatcggtgcgattaaaggcgtcggtgaa
ggccccattgaagccattatccatgcgcgtgaaactcatggtttcttcactgatttattt
gatttctgtggcaaggtcgaattgaagcgcgtaaacaaacgcgtgttggaaaaattagtg
ttggcgggggctatggataacctcgggcctcatcgtgcggcactgatggcaaccttgccc
gatgcgctggctgcagcagaacaacacagaaaagccgaatcctgcgggcaatcagacatg
tttggtttgatgaccaatgaaccggaagatgtgtctgctactttcgttgatgtacctgaa
tggccggagaaacaatggctggatggtgaaaaggaaaccttgggtctgtatttgaccggg
catcctatcaaccaatatcgcgatgaaattaagcattattgttctggccgtttggtggat
cttaaacccacagcacgagacggtaacattactgcggtaggcttggtgttgtcggttcgt
gtgttagtgaataaaaaagggcggcgttgggcgattgtgacattggatgataagagtgcc
cgggttgatgcgcgctttttcccggatgattttgaaaaatacgaagagattttacagaca
gataaagtgctggtggtcagcggctctgtcagttttgatgatttttctggtggtcatacc
atcacagtgcgcgaagcaatggataatatcaaggcacgagaaaaatacttgaaacgtatt
caactgactttggacgacgcctggattgagccaggtaatattcaaaagctacaggcaatt
atgcagaactatagaaacggcgcttgtcccgtttctatcaagtacatgcatgaggatgcc
gaggcggttttgaatgttggggcaatgtggtatctggttcctgaagaccaactgctgcat
gagcttaagcaactgttaagtcctgagcaggtaagtttaaaatttcattag
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