Paraneptunicella aestuarii: KIH87_06555
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Entry
KIH87_06555 CDS
T07748
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paew
Paraneptunicella aestuarii
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paew03016
]
KIH87_06555 (truB)
Enzymes [BR:
paew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KIH87_06555 (truB)
Transfer RNA biogenesis [BR:
paew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KIH87_06555 (truB)
Prokaryotic type
KIH87_06555 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UAA40004
LinkDB
All DBs
Position
1573957..1574889
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AA seq
310 aa
AA seq
DB search
MGRRRNKGRDISGVFLLDKHLGGSSNQVLQQLKRLYDAQKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKTYEVTAELGIRTTTSDADGEVVETNPVDVSEQQLLAAMEPFKGKTQ
QVPSIYSALKYEGKPYYYYARQGIDIPRKSREITIFALELLRFDGKFADMKVRCSKGTYI
RSLVDDIGQALGCGAYVTRLHRTEVANYPAEQMMSLEVLTEKLEAIPEEEQQSYLDSLLL
PIDAPVSNLPVYHLSADEARDLSFGRQVKVQAENADLGLCRAYEAQSERFLGLVEIEHGL
LSAKRLVSTQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacgtcgtaataaaggccgtgatatcagcggtgtatttcttcttgataagcat
ttaggtggctcttccaatcaggtattgcagcaactaaagcgcttatatgatgcccagaag
gccgggcataccggagcgctggatcctttggcaaccggtatgctgccaatctgtttggga
gaagcgaccaagttctcgcaatacttgctcgacgctgataaaacctatgaagtgactgct
gaactgggtattagaacgaccacctctgacgctgatggtgaagtagttgaaaccaaccct
gttgatgtgtcagaacagcagctattggcagcaatggaaccgttcaaaggcaagacccag
caagtcccttccatttattcagctctgaaatacgaaggtaagccttactattactacgct
agacaaggtatagatatcccgcgcaaatcgcgtgagatcactatctttgcattggagtta
ttgcgcttcgatggcaagtttgccgacatgaaagtacgttgtagcaaagggacttatata
cgcagtctggttgatgatattggtcaggctttaggttgtggcgcttatgtcacgcgttta
catcgtaccgaagtggctaattatcccgctgaacaaatgatgagtttggaagtgctaaca
gaaaagcttgaagctattccagaagaagagcagcaatcctatctggactcattgttgttg
cctattgatgcgccggtcagtaatttgcctgtgtatcatctcagtgctgatgaagctcgc
gatctgagctttggtagacaagtgaaggtacaagcagaaaatgcggatttagggctttgc
agagcctatgaagcgcaatctgaacgctttctgggattggtcgaaatagaacatgggctt
ctatcggcaaagcgtttggtatctacccaataa
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