Paraneptunicella aestuarii: KIH87_08715
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Entry
KIH87_08715 CDS
T07748
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
paew
Paraneptunicella aestuarii
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paew03032
]
KIH87_08715 (ihfB)
03036 Chromosome and associated proteins [BR:
paew03036
]
KIH87_08715 (ihfB)
03400 DNA repair and recombination proteins [BR:
paew03400
]
KIH87_08715 (ihfB)
DNA replication proteins [BR:
paew03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KIH87_08715 (ihfB)
Chromosome and associated proteins [BR:
paew03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KIH87_08715 (ihfB)
DNA repair and recombination proteins [BR:
paew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KIH87_08715 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_euk_1
TAF
Motif
Other DBs
NCBI-ProteinID:
UAA40398
LinkDB
All DBs
Position
2101068..2101355
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADKARHMQAKDVELAIKEILEQMAQTLQRGERIEIRGFGSFSLHYRAPRV
GRNPKTGESVKLDGKYVPHFKPGKELRERVNDLIL
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagagcttattgagcgtttagctgataaagcgcggcatatgcaagcaaag
gatgttgaactggctattaaggaaattcttgaacaaatggctcaaaccctacagcgtggt
gaacggatagaaatccgcgggtttggtagtttttccttgcattaccgagctccaagagtt
gggcgtaatcccaaaactggagagtctgtaaaacttgatggaaaatacgtgcctcatttt
aagcccggaaaggaactgcgggaaagagtcaacgatttgatcctgtaa
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