KEGG   Paraneptunicella aestuarii: KIH87_10000
Entry
KIH87_10000       CDS       T07748                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
paew  Paraneptunicella aestuarii
Brite
KEGG Orthology (KO) [BR:paew00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paew02044]
    KIH87_10000 (tssC)
Secretion system [BR:paew02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KIH87_10000 (tssC)
SSDB
Motif
Pfam: VipB T6SS_VipA VipB_2 DUF4347
Other DBs
NCBI-ProteinID: UAA40641
LinkDB
Position
2449657..2451816
AA seq 719 aa
MSNSIQHKLSRVRPPRVQITYDVETGGAIEKKELPFIVGIIAPLSAKSDKKMPPLRDRKM
VQIDRDNFNKVMESIEPRLKYSVPNTLPGEKEPMQVNVAFHHIDDFDPVAVVNRVPKLKA
LYDERSRLRDFLAKLDGNDGLNNILVNILKDKDKLDAIKAVIDGAKETLAANREKLAKSE
LDQKAYDDATLELFKDELADGKDINSMLTDGQLILDQPQKPYALELIAEYVTQILANDDL
IPKAEGKDAPDYNIGGMITTRIAQKDKVISRQLNHIIHHDEFQALEGSWRGLHFLVMNTE
TSTKLKLKLLNVSYDDLYKDLDKAVEFDQSALFKIVYEEEYGTFGGEPYSVLIGDYQLGR
TARDIKFLEMISGVAAAAHAPFIASAYAKLFDLEDYANLYKPRDLSKIFESAELIKWRSF
RETEDSRYVTLTLPRVMLRLPYHHENNPVEGIYFDEDVAVNLYKTDDDGNLVLEGGKPVW
VLDKDDDGIEFEKTIKQVDARKILWGNPAYILGQRITNAFSLHGWTAAIRGVEGGGLVEG
LPAYTFETENGDIDLTCPTEVSITDRREKELNDLGFMAICHCKGTDKAAFFGGQSTNKPK
QYLTDSATANARISSMLPYVMSASRFAHYIKVLMREKIGSFMTRQNVEAYLNTWIAQYVL
LDDTPPQHIKAKYPLREARINVTDVPGKPGAYRATVFLKPHFQLEELSTSIRLVADLPS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgtcgaatagcatacaacacaaactgagtagagtacgccctcccagggttcaaatcaca
tacgatgttgaaacggggggagcgattgagaagaaggaactcccttttatagtagggatt
atcgcaccactatcagcgaaatctgataagaaaatgccaccattgcgtgacagaaaaatg
gtgcaaatagaccgcgacaatttcaacaaagtcatggaatccattgagccgcgactcaag
tacagtgttcctaatacactgccaggagaaaaggaaccaatgcaggtaaacgttgcgttt
caccacattgacgatttcgatcctgttgcagtggttaatcgcgtaccgaaactaaaagcg
ctttatgatgaacgcagcagactgcgtgacttcctggccaaattagacggtaacgacgga
ttaaataacattctggttaatatcttgaaagacaaagataaactggatgccattaaagca
gtcatcgacggcgctaaagaaacattagcggcaaatcgcgagaaacttgcgaaaagcgaa
ctggatcagaaagcctacgatgacgcaacactggagttgttcaaagatgaactggcagac
ggtaaagacatcaacagtatgttaaccgacggccaattgattttggatcaaccacaaaag
ccttatgcgttagaactgattgcagaatatgtgactcagatcctggctaatgacgatctt
atcccgaaagctgaaggtaaagatgcccctgactataacatcggtggcatgatcacaaca
cgtatcgcgcaaaaagataaagtcatcagccgacagttaaaccacattatccatcatgat
gaattccaggctctggaaggcagctggcgtggtttacacttcctggtaatgaacactgaa
accagcaccaagttgaagttgaaattgttgaacgtgtcatacgacgacctttacaaagac
ttggataaagcggttgagtttgatcaaagcgccctattcaaaatcgtttatgaagaagaa
tacggtacatttggtggcgaaccctacagtgtactgattggtgactaccaattaggccgt
acagcccgagacatcaagttcctggaaatgatcagcggtgttgcagcagcagctcacgcc
ccattcattgcctcagcttacgcgaaactgtttgacctggaagattacgccaacctgtac
aaaccaagagatctgagcaagatcttcgaaagtgccgagctaatcaaatggcgttcgttc
cgtgaaacagaagattcacgctacgttaccctgaccttacctcgcgttatgcttcgctta
ccttatcatcatgaaaacaacccggttgaaggtatctacttcgacgaagatgttgcagta
aacctgtataaaaccgacgatgatggcaatctggtacttgaaggtggcaaaccggtttgg
gttctggacaaagacgacgacggcattgagttcgagaaaaccattaagcaagttgatgct
cgcaagattttgtggggcaacccggcttatattcttggacaacgtatcaccaacgctttc
tcactgcacggctggactgccgctattcgtggtgttgaaggtggtggattggttgaaggc
ttacctgcctatacctttgaaaccgaaaacggtgacatcgatctaacctgcccgactgaa
gtgtctattactgaccgtcgtgagaaggaattgaacgacttgggcttcatggctatttgt
cactgtaaaggtacggataaagccgccttcttcggtggtcaaagcaccaacaagccaaaa
caatatctgactgacagtgcaacggcaaatgcgcgcatttcgtccatgttgccatacgtt
atgtcagcctctcgttttgctcactacatcaaggtattgatgcgcgagaagattggtagc
ttcatgactcgtcaaaacgttgaagcttacctgaacacatggattgctcaatatgtattg
ctggatgacactccacctcaacatatcaaggctaaatatccattacgtgaagctcgcatt
aacgtcaccgacgtaccagggaagccgggagcataccgtgccacggtattcttgaaacct
cattttcagttagaagaactctccacctcgattcgtctggtggcagatcttccttcctga

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