Paraneptunicella aestuarii: KIH87_15620
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Entry
KIH87_15620 CDS
T07748
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
paew
Paraneptunicella aestuarii
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paew03021
]
KIH87_15620 (rapA)
Transcription machinery [BR:
paew03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KIH87_15620 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UAA38101
LinkDB
All DBs
Position
4038934..4041810
Genome browser
AA seq
958 aa
AA seq
DB search
MNQTAAFYPGQRWLSNAEMELGLGTVIAVTDRAINLLFPATGEGRNYAIKDAPLTRVAFS
AGDTADHAEGWSFSIESVQEQNGMLTYFGVRSDSKEKVEVKETFLAHDFQLNAPEQRLFS
GQFDNPKWFDIRKQCLLQQHAHLTSPLLGFVGARVELIQHQIHIAREVGQRFAPRVLLAD
EVGLGKTIEAALIIHQQLLTGRAQRVLIVVPSSLVHQWLVEMLRRVNLAFAIFDEERCDA
ASEDGGNPFESEQLILCSLDFLTENEKYFGLARDAGWDLLVVDEAHHLRWSPQEASQEYQ
VVQEIAANTKGVLLLTATPDQLGHESHFARLRLLDADRFHDYQRFIEEEQQYAELAQAIA
PLLSILDSGTSHIDTLSLEHIKAIESFAGKQEWLSAPEQLKPDAINKLISELLDRHGTGR
LLFRNSRNNIAGFPKRILNSYPLAMPATYKEAAESGKPDIHPEAGLRKRLAPEKAMLDAK
EWHDEDPRVSWFIEKLQALQGKKVLTICAKSSTALALAEAVRLKSGIRTAVFHEHMTIVD
RDKAANYFAQTEDGAQVLICSEIGSEGRNFQFAHHLVLFDLPLIPDLLEQRIGRLDRIGQ
TQDINLHVPYFEGSAQEVMLNWYHQSLNAFEHTCPTGGVIYEQVREELGNCLRQPQDSDA
TAQLIESTKHLHLDMLQKLEQGRDRLLELNSSGQGKIAPFIESIQDSDDSPYLEKFMSNL
LDGLGVAQEERDEETYFLRPTESMISTLPGMDDEGMTVTYERKTATQLEHVHFLSWDHPL
VNNAMDMLLAENNGKSSVCLFTDKTKPAGYFWLECLYVLTGHADKSLQLHRFLPPTPINI
SLDAKQTLITDEFQDLQSVKGKIGRQLCQALNKHITKTLESASQLAEKQANQIMHTQAEQ
VKQLLGDEINRLLSLSKINPSIREEEIQFLQTQYDGLLNAISSAKVRLEAVRLIVNNP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacagcagctttttatcctggccaacgctggctcagtaatgccgaaatggaa
ctcggacttggtactgtcattgccgtcacagacagagcgatcaatttattatttccagcg
acgggagaaggtcgcaattacgccataaaagacgccccgctgacccgcgtcgccttcagt
gctggcgatacggctgaccacgcagaaggttggagtttcagtatcgaatcggtacaagag
caaaacggcatgctgacttattttggcgtccgtagcgactcaaaagaaaaggtggaagta
aaagaaacctttttagcacacgatttccaactgaacgcccctgaacaacgcttattcagt
ggtcagtttgacaaccccaaatggttcgatattcgtaagcaatgtctgttacaacagcat
gcacacctaacctcacccttattaggttttgttggcgcacgagtagaactgattcaacac
cagatccacattgcccgagaagtgggtcaacgtttcgcaccacgtgttttgctagctgac
gaagtgggtttgggtaaaaccatcgaagcggcgttgattatccaccagcaactattaacc
ggcagagcgcagcgcgtgctaattgttgtgccttcaagtctggtgcatcaatggctggtt
gaaatgctgcgccgggtcaacctcgcctttgctatttttgatgaagaacgctgtgacgca
gccagtgaagatggcggcaatccttttgaaagcgaacagctgattttatgcagtctcgat
ttcctgaccgagaacgaaaaatacttcggccttgcccgcgatgcgggctgggatttattg
gtcgtagacgaagcccatcacctacgctggagtccgcaagaagcgtctcaggaatatcag
gttgttcaggaaattgcagctaacaccaaaggcgtgcttctgcttactgctacaccagat
caacttggtcatgaaagccatttcgctcgcttacgattattagatgccgaccgctttcat
gattaccaacgttttattgaagaagaacaacaatatgctgagctggcgcaagccattgcg
cctttattgagcattcttgattctggtacaagccatatcgacacgctaagccttgaacat
attaaggcaatagaatcctttgcaggtaagcaggagtggttgtctgcacctgaacaactg
aaaccagacgctatcaacaagctgatttccgagttgctggatcgacatggaaccggacgc
ttattgttccgtaacagtcgcaacaatattgcaggtttcccgaaacgtattctgaattcc
tatccattagctatgcctgcaacctataaagaagcggcagaaagtggcaaaccggatatt
catccagaagcgggtttacgtaagcgtttggctcctgaaaaagccatgctggatgccaaa
gaatggcacgatgaagacccaagagtcagctggtttatcgaaaagttacaagcactgcaa
ggcaagaaagtcctgactatctgtgccaaaagctccacagccttagccttggctgaagcg
gttcgcttaaaatcaggcattcgcactgcggttttccacgaacacatgactattgtggat
cgcgataaagccgccaattacttcgctcaaaccgaagacggtgcgcaagtattgatttgt
agtgagatcggcagtgaaggacgcaacttccaatttgcccatcatctggttctgtttgat
ttaccattaattcccgacttgctggaacagcgtattggacgccttgaccgtatcggtcaa
actcaggacatcaacctgcatgttccttacttcgaaggctcagctcaggaagtgatgctg
aattggtatcatcaatcgctgaatgcgttcgagcatacctgccctactggcggtgtaatc
tatgaacaggtgcgtgaagagttaggcaactgtctgcgtcaacctcaagatagcgacgct
acagcgcagctgatcgaatcgaccaagcacctacacctggacatgctacagaagctggaa
caaggaagggatcgcctgttagaactgaattcttcgggtcagggcaaaatcgcaccattt
atcgaatccatccaagactccgatgattctccttatctggagaaattcatgagtaatctg
ctggatgggcttggtgttgcgcaagaagagcgtgacgaggaaacctacttcctacgtcca
actgaaagcatgatcagcaccttgccaggtatggatgatgaaggtatgacggtgacttat
gaaagaaaaaccgccacgcaactagagcatgttcacttcctgagctgggatcatccattg
gtgaataacgccatggacatgctgttggcggagaataatggtaagagctccgtttgtctg
tttaccgacaaaaccaaacccgccggttacttttggctggaatgcctatatgtgctgaca
ggtcacgccgacaagtctttgcaattgcatcgtttcttgcctccaacaccaatcaatatc
agtcttgatgccaagcagacactgatcaccgacgagttccaggatctgcaatcagtaaaa
ggcaagataggccgccaattgtgtcaggctctgaacaaacacattacaaagacattggaa
agcgcttcacaactcgcagaaaaacaagccaaccagattatgcatacccaagctgaacag
gtgaaacagctattgggagatgaaatcaatcgcttgttatctctgagcaaaatcaatcca
tcgattcgagaagaagaaatccagtttctgcaaactcaatatgatggcttgttgaatgcc
attagcagcgccaaggttcgtctggaagcggttcgcctgatcgtaaacaatccataa
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