Paraneptunicella aestuarii: KIH87_15715
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Entry
KIH87_15715 CDS
T07748
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
paew
Paraneptunicella aestuarii
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paew03016
]
KIH87_15715 (truD)
Enzymes [BR:
paew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KIH87_15715 (truD)
Transfer RNA biogenesis [BR:
paew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KIH87_15715 (truD)
Prokaryotic type
KIH87_15715 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UAA38119
LinkDB
All DBs
Position
4062199..4063311
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AA seq
370 aa
AA seq
DB search
MTNLSTEHWSYFLGKPEITAVLKQQPEDFQVTEILPFEPCGEGEHIFLWIEKTGLNTAFV
GEQLAKFTGLHLRNVSFAGRKDKHAVTKQWFSIHAPGNQDFDWSSFELEGCRILNVIRHN
KKLRTGSLSGNRFSITLRELNTTERLEERLNQIQLNGVPNYYGQQRFGEIRQATDPQTGE
SLSGGSLLGGSLLGGNLALAQKMIQGEEIRNRNKRSMAISALRSWLFNEFVHQRLQASRS
LEQPQPYEHALPGDVFILSGSNSFFSQEELDETIHNRLHERDINLSAPLWGKGELDSKLD
ALKLETEIAAQFDDICQHLASLGLKQERRNIWLFPKAMQWQIQHNTVTITFELPSGCFAT
SVIRELANTL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacttaagcaccgaacactggagttacttccttggcaaaccagaaatcaccgct
gtattaaagcaacagcccgaagattttcaggttacagaaatactgccttttgaaccttgt
ggcgaaggtgagcacatcttcctctggattgagaaaacaggcttgaataccgcttttgtt
ggagagcaattagcaaaatttaccgggttacatcttcgtaacgtgagttttgctgggcga
aaagacaaacatgccgtaactaaacagtggttcagtattcacgcgccgggcaatcaggac
ttcgactggtcatcatttgaattagaaggctgccgcattctcaatgttatcaggcataac
aagaaactgcgtacaggcagtttaagtggcaaccgtttctctattactctgcgcgaatta
aatacaactgaaaggctggaagaaagactaaaccagattcagttaaatggtgtacccaat
tattacgggcaacagcgttttggtgagattcgtcaagctacagatcctcaaacgggagag
tctttatcaggaggttctcttttaggtggctctcttttgggaggaaatctggccctcgct
caaaaaatgattcagggtgaagaaatccgtaaccgtaataagcgctcaatggccatttcc
gctttgcgctcgtggctattcaatgagtttgtgcatcaacggttacaggcgtctcgctcg
ttagagcagccgcaaccctatgagcacgccctgccaggtgatgttttcatcttatccgga
agcaacagttttttctcgcaagaggaattagacgaaacgattcacaataggcttcatgag
cgagacattaatctttccgcaccgttatggggtaaaggcgaattagattccaagctggat
gctcttaagctggaaacagaaatagccgctcagtttgatgacatctgtcagcatctggcc
tctttgggtcttaagcaagaacgccgaaacatttggttatttcccaaagcaatgcagtgg
caaatacaacataatacagtaaccattacttttgagttaccttccggttgctttgcaacc
tcagtcatcagagaattagccaacacgctctga
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