Paraneptunicella aestuarii: KIH87_15985
Help
Entry
KIH87_15985 CDS
T07748
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
paew
Paraneptunicella aestuarii
Pathway
paew02020
Two-component system
paew02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KIH87_15985
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KIH87_15985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paew03000
]
KIH87_15985
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paew02035
]
KIH87_15985
Transcription factors [BR:
paew03000
]
Prokaryotic type
Helix-turn-helix
Other families
KIH87_15985
Bacterial motility proteins [BR:
paew02035
]
Flagellar system
Flagellar assembly proteins
Others
KIH87_15985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
AAA_7
AAA_19
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
UAA38172
LinkDB
All DBs
Position
complement(4116386..4117867)
Genome browser
AA seq
493 aa
AA seq
DB search
MSRILIISTLESRYQNLQTVCTFIGDECVVQPIDQAEEFLRSASGIGAIILAGDEFQNAH
SFVKLFPGLPFIVINDQHQLQQQLVNVVGELEEPVTYPILTRLLHRCQEYIKHKPGTESQ
LRDAKFQNLVGKSKEIQEIRRMIQQVAPTDANVLVLGESGTGKEVIASNVHYLSNRKSGP
FIPVNCGAIPGELLESELFGHEKGAFTGAVSSRKGRFELAQGGTLFLDEIGDMPLQMQVK
LLRVLQERTYERVGGTKPIECDVRIIAATHRNLESMISSGDFREDLYYRLNVFPIENPSL
RERKEDIPLLLQEIISRFEVREGKSVKFTEEALNSLMEHKWAGNVRELSNLVERMVILCP
NQVVNVQDLPPKYQHVEFAEYQPEYPDELLEREALNSLFGDFDDDSDDSSDVEEQFNVES
SGSEGMALSIPEPGSITLPEEGMNLKDYLSNLEIDMITKALDQHDWVVARTAEFLGMRRT
TLVEKMRKYNISK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtatcctgataataagtacactagaatcgcgctatcaaaatttacaaaccgtt
tgcactttcattggtgatgaatgtgttgtgcagcctattgatcaagctgaagagttttta
cgtagtgcttcaggtataggtgccatcattcttgctggtgacgagtttcaaaatgctcat
agctttgtgaagctatttccggggttaccttttatcgttatcaatgaccaacaccagttg
caacagcaattggtgaatgtggttggtgagcttgaggagcctgtcacttatcccatcttg
acccgcttattacatcgctgtcaggaatatataaagcataaacctggtactgaatcacaa
cttcgggatgctaaattccagaatttggtgggtaaaagcaaagagatccaggaaattcgc
cgtatgatccagcaggtggctcctacggatgccaatgtgcttgtattgggggaatctggt
acaggtaaggaagttattgccagtaacgttcactatctttcaaatcgtaagtcagggccc
tttattccggtaaactgcggtgctattccgggagagttattggaaagtgaattatttggt
catgaaaagggcgcatttaccggagcggtgagttctcgtaaaggtcgctttgaattggct
caaggcggtacattattcctggatgagattggtgatatgccactgcaaatgcaggtaaaa
ctgctgagggtacttcaggaacgtacttatgagcgtgtcggtggtactaagccaattgaa
tgcgatgttcgtattattgcggcgacacatagaaatctggaatccatgatttcgtccggc
gattttcgagaagacctgtattatcgcttgaatgtgtttcctatcgaaaatccttcgttg
cgtgaacgcaaagaggatattcccttattgctgcaagagatcatctctcgatttgaagtg
cgagaaggtaaatctgtgaagtttaccgaagaagccctcaattctttgatggagcacaag
tgggcaggtaatgtacgtgaattgtccaatctggttgaacgtatggttattctgtgcccg
aatcaggttgttaatgtgcaagatttaccacccaaatatcagcatgttgaatttgctgaa
tatcaacccgaataccctgatgaattattggaaagggaagcgttaaactcgctgttcggt
gattttgatgatgacagcgacgatagttctgatgtagaagaacaatttaatgtagagtct
tctggttctgaagggatggctctcagcatacctgaaccgggttccataacattgccggaa
gaagggatgaatctgaaagattatttgtcgaatctggaaatcgacatgatcaccaaagca
ttggatcaacatgattgggttgttgctcgtacagcagagttcttgggcatgagaagaaca
acgctggtggaaaaaatgcgtaaatacaatatctccaagtag
DBGET
integrated database retrieval system
