KEGG   Paraneptunicella aestuarii: KIH87_17200
Entry
KIH87_17200       CDS       T07748                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
paew  Paraneptunicella aestuarii
Pathway
paew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KIH87_17200 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paew03021]
    KIH87_17200 (rho)
   03019 Messenger RNA biogenesis [BR:paew03019]
    KIH87_17200 (rho)
Transcription machinery [BR:paew03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     KIH87_17200 (rho)
Messenger RNA biogenesis [BR:paew03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     KIH87_17200 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 S1CSD-TOTE-2 AAA_22 AAA
Other DBs
NCBI-ProteinID: UAA38400
LinkDB
Position
complement(4416339..4417604)
AA seq 421 aa
MNLTELKKKPINELVDLAEEMAIENMARARKQDIIFAVLKKHAKGGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDSERYFALLKINEVN
FDKPENSRNKILFENLTPLHANERMVMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTLLLQNIAQSITANHPECQLMVLLIDERPEEVTEMQRLVQGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHKPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTAPDELQKMWILRKIVHEMSEIDAMEFLIGKLSMTKTNDEFFDAMRRQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatctaacagaattaaaaaagaaacccattaatgaacttgtcgaccttgctgaagaa
atggctatcgagaatatggctcgagcgcgaaagcaagatattatttttgcagtgttgaag
aagcacgctaaaggtggcgaagacatttttggtgatggggttctggaaattttgcaagat
ggattcggctttttacgctcggcagattcttcttatttggctggccctgatgacatctat
gtttcgccaagtcagattagacgatttaaccttcgcactggtgataccatttccggtaaa
atcagacctccaaaagacagcgaacgttattttgccctcttaaaaatcaatgaagttaac
ttcgacaagcctgaaaactcccgcaataaaatcctttttgaaaaccttactcctctacat
gctaacgaacgtatggtcatggagcgtggtaatggtagtaccgaagatatcactgcgcga
gtattggacttggcttctccgatcggtaaaggccagcgtggtttgattgtggctccgcca
aaagcgggtaagacattgctgctacagaatattgctcagtctattacggccaatcatccg
gaatgccaactgatggtgttgttgattgatgaacgtccggaagaagtaacagaaatgcag
cgcctggttcaaggcgaagtagttgcttctacgtttgacgagccagcaagccgtcacgtt
caggtggctgaaatggttatcgagaaagccaagcgtttggttgagcacaaaaaagacgtg
gttatcctgcttgactcaattactcgtttagcgcgtgcttataacacagttattccttcc
tccggtaaggtacttactggtggtgttgatgctaacgcattgcataagcctaagcgtttc
tttggtgccgctcgtaatgttgaagaaggcggaagcttgaccatcattgcaaccgcattg
attgataccggttccaagatggacgaagttatctacgaggagtttaaaggtacgggtaac
atggaattgcatctgaacagaaagattgctgaaaaacgtgtgttccctgccattgacttc
aaccgttctggtactcgtcgtgaagagctgctaacggcacctgatgaactgcaaaaaatg
tggattttacgcaaaatcgttcatgagatgtcagaaattgatgcaatggaattcttgatt
ggtaagctctctatgaccaaaaccaatgatgaattcttcgacgcaatgcgtaggcagaaa
tcttaa

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