Paraneptunicella aestuarii: KIH87_17915
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Entry
KIH87_17915 CDS
T07748
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
paew
Paraneptunicella aestuarii
Pathway
paew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIH87_17915 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paew03019
]
KIH87_17915 (pcnB)
Enzymes [BR:
paew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KIH87_17915 (pcnB)
Messenger RNA biogenesis [BR:
paew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KIH87_17915 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UAA40870
LinkDB
All DBs
Position
complement(4565980..4567281)
Genome browser
AA seq
433 aa
AA seq
DB search
MPRAEHQISREDISDNALKVLYRLHNAGFQAYLVGGCVRDLMLGLHPKDFDVATDATPEQ
VKGLFRNCRLIGRRFRLAHIIFGREIIEVATFRGHHVPEETEAPVGKKVTSHQNQHGQLI
RDNVFGSIEEDAERRDFSFNAMYYNIADFTVTDFANGVESLKKREIVLIGDPETRYREDP
VRMLRAIRFAAKLNMNIDSKTAELIPQLAPLLANIPPARLFEEVSKLMLLGSGLKTFVLL
QEYKLFGQLFPQLQPFLDNQKGREYQLLEKVLSNTDNRINSGLRITPAFFYAASLWYCVE
DRMQQHMGEGGLPAHDAFNLAITDVLSRQVQRIMIPKRFTTPIRDIWYLQQRLSKRLGRR
AYITMEHPRFRAAYDFLLIRSEIEGGELTELAQWWTEFQEAAPGKQKKMQSSLRNNEGGN
RRRSRPNKPRKPS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atcccgcgtgctgaacatcagatttcccgtgaagatatcagcgataatgcattgaaggtg
ttgtatcggttgcataatgccggttttcaggcctatttggtcggtggatgcgtgcgtgac
ctaatgttgggattgcatcccaaagatttcgatgtcgcgactgatgcaacgcctgaacag
gtgaaaggcctgttccgtaattgccgtctaatcggacgccgctttcgtttggctcatatt
atctttgggcgtgaaatcattgaggtcgcgactttccgtgggcatcacgttccagaagaa
acggaagctcctgttggcaagaaggtaaccagtcatcaaaatcagcatggtcagttaatt
cgagacaatgtttttggaagcattgaagaagatgccgagcgtcgagattttagcttcaac
gcaatgtattacaacattgccgatttcacagttaccgattttgctaatggtgttgaatct
ctgaaaaagagagaaattgttctgattggcgatccggaaacccgctatcgcgaagatccg
gtaagaatgctgcgagctattcgcttcgccgccaaactgaacatgaatattgactctaaa
acggcagaacttattcctcaactggctcccttgctggctaatattccacctgcaaggctg
ttcgaagaagtgtctaaattaatgctgttgggcagtggtttgaaaacctttgttttacta
caagaatacaagctgtttgggcagttattcccgcaattgcaaccctttttggataatcag
aagggcagggaatatcagttgctggaaaaagtgttgagtaacacagataaccgcatcaat
agtggtttacgtatcactccagcctttttctatgccgcgagcttatggtattgcgtggaa
gatcgtatgcaacagcatatgggagaaggtggcttacccgctcacgatgcctttaatttg
gcgattaccgacgtgttatcgcgtcaggtacaaaggatcatgatcccgaaacgctttacc
acgcctattcgcgatatttggtatttgcagcaacgcttgagtaagcgtttggggcgcaga
gcctatattacgatggaacatccgcgctttagagctgcatatgattttctgctgattcgt
tcagaaattgaaggcggtgaattaaccgagttggcgcaatggtggactgagtttcaggaa
gccgcccccggaaagcagaagaaaatgcaatcttcattgcgtaataatgagggcggaaac
cgtcgccgtagccgaccgaataagccgagaaagccttcgtga
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