Paracoccus aestuarii: JHW48_00050
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Entry
JHW48_00050 CDS
T08926
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
paex
Paracoccus aestuarii
Pathway
paex00521
Streptomycin biosynthesis
paex00523
Polyketide sugar unit biosynthesis
paex00541
O-Antigen nucleotide sugar biosynthesis
paex01100
Metabolic pathways
paex01110
Biosynthesis of secondary metabolites
paex01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JHW48_00050 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHW48_00050 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JHW48_00050 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JHW48_00050 (rfbB)
00525 Acarbose and validamycin biosynthesis
JHW48_00050 (rfbB)
Enzymes [BR:
paex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JHW48_00050 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
adh_short_C2
Sacchrp_dh_NADP
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WCQ99218
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All DBs
Position
complement(10571..11608)
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AA seq
345 aa
AA seq
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MRILITGGAGFIGSAVVRLAVARGHDVVNLDTLTYAANLENVASVAGSDRYAFEHADIRD
RAALDRILARHRPDAILHLAAESHVDRSIDGPDSFIQTNVIGTFTLLEAARAYWTAAGRP
EGFRFHHVSTDEVFGSLGPEGRFSETTPYDPRSPYSASKAGSDHLVRAWSETYGLPVLLT
NCSNNYGPFHFPEKLVPVVILRALAGQPIPVYGDGLHVRDWLYVEDHAEALLTVLTQGRP
GRSYAIGGENEVANIDLVRMICAHMDRLHPEGAPHDRLIAFVPDRPGHDRRYAIDPARIR
SELGWRPSVSVDEGLGRTVAWYLDNRDWWQPLLARDGVGRRLGTG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgatcaccggcggcgccggcttcatcggatcggcggtggtgcggctggcc
gtggcgcgcggccatgacgtggtgaacctggacacgctgacctatgccgcgaacctggag
aacgtggcctcggtggcgggttcggaccgctacgccttcgaacatgccgacatccgcgac
cgcgcggccttggaccgcatcctggcccggcaccgccccgatgccatcctgcacctggcc
gccgaaagccatgtggaccggtccatcgacgggccggacagcttcatccagaccaatgtg
atcggcaccttcaccctgctggaggccgcgcgcgcctattggaccgccgccgggcggccg
gaggggttccgcttccaccatgtctcgaccgacgaggtcttcggatccctgggccccgag
ggccggttcagcgagacgaccccctatgatccgcgcagcccctattcggccagcaaggcg
ggctcggaccacctggtccgcgcctggtccgaaacctatggcctgccggtcctgctgacc
aactgctcgaacaattacgggccgttccattttcccgaaaagctggtgccggtggtgatc
ctgcgcgccttggccggccagccgatccccgtctatggcgacgggctgcatgtgcgcgac
tggctctatgtcgaggatcacgccgaggcgctgctgaccgtgctgacccaaggccgcccc
ggccgcagctatgccatcggcggcgagaacgaggtcgccaatatcgacctggtgcggatg
atctgcgcgcatatggaccggctgcaccccgagggcgccccccatgaccggctgatcgcc
ttcgtgcccgaccggcccggccatgaccggcgctatgccatcgaccctgcgcgcatccgg
tccgagctgggctggcgcccctccgtctcggtcgacgaggggctgggccgcacggtggcc
tggtatctggacaaccgcgactggtggcagccgctgctggcgcgcgacggcgtgggccgg
cgcttggggacgggctga
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