Paracoccus aestuarii: JHW48_00055
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Entry
JHW48_00055 CDS
T08926
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
paex
Paracoccus aestuarii
Pathway
paex00521
Streptomycin biosynthesis
paex00523
Polyketide sugar unit biosynthesis
paex00541
Biosynthesis of various nucleotide sugars
paex01100
Metabolic pathways
paex01110
Biosynthesis of secondary metabolites
paex01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JHW48_00055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHW48_00055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JHW48_00055 (rfbC)
Enzymes [BR:
paex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JHW48_00055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WCR00559
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All DBs
Position
complement(11605..12159)
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AA seq
184 aa
AA seq
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MQIDPTPLPGVVVLTPARHGDDRGFFSESWNRRTLREAGLDLPDIVQDNHSMSMRAGTLR
GLHYPAPPHAQGKLVRCGRGSPFDVAVDARRGSPTYGQWFGTELSFADGRQLWIPAGFLH
GFVTRAPETEVIYKCTAHYDRAADGAVAWDSLGIDWGVRDPVLSEKDRAAPAFADGTSPF
ASDA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atacagatcgaccccacccccttgcccggcgtcgttgtcctgacgcccgcccgccacggc
gacgaccgcggcttcttctcggaaagctggaatcgccgcacgctgcgcgaggcggggctg
gacctgccggatatcgtccaggacaaccattcgatgtcgatgcgcgcgggcacgctgcgg
gggctgcattacccggccccgccccatgcccaaggcaagctggtgcgctgcggccgcggc
agcccgttcgacgtggcggtggatgcccggcggggcagccccacctacgggcaatggttc
gggaccgagcttagtttcgccgatggccgccagctgtggatccccgcgggcttcctgcac
ggcttcgtcacccgcgccccggagaccgaggtgatctacaaatgcaccgcccattacgac
cgcgccgccgacggggcggtggcatgggacagcctgggcatcgattggggcgtccgcgat
ccggtcctgtcggaaaaggatcgcgccgcgcccgccttcgcggacgggaccagccccttt
gcgagtgacgcatga
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