Paracoccus aestuarii: JHW48_00225
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Entry
JHW48_00225 CDS
T08926
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
paex
Paracoccus aestuarii
Pathway
paex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW48_00225 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paex03021
]
JHW48_00225 (rho)
03019 Messenger RNA biogenesis [BR:
paex03019
]
JHW48_00225 (rho)
Transcription machinery [BR:
paex03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JHW48_00225 (rho)
Messenger RNA biogenesis [BR:
paex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JHW48_00225 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
ATPase_2
OB_RNB
AAA
Fungal_virus_P2_C
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WCQ99242
LinkDB
All DBs
Position
complement(39232..40503)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEDRLNLSDLKAKSPADLLSMAEEWEIENASTMRKGEMMFSILKEHAEEGWEIGGGGVL
EVVQDGFGFLRSTEANYLPGPDDIYVSPDMIRQHSLRTGDTVDGVIRAPGENERYFALTK
VEKINFEDPEKARHKVAFDNLTPLYPDERLKMEIEDPTIRDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIEKNHPECYLIVLLIDERPEEVTDMQRSVRGEVVSSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDSKDLQKTYLLRRILNPMGTTDAVEFLISKLKQTKSNSEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaccgcctgaacctgtccgacctgaaggccaagagccccgccgacctgctg
tccatggcggaggaatgggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgatcctgaaggagcatgccgaggagggctgggagatcggcggcggcggcgtgctg
gaggtcgtgcaggacggattcggcttcctgcggtcgaccgaggcgaactatctgcccggt
cccgacgacatctatgtcagcccggacatgatccgccagcattcgctgcgcaccggcgac
acggtcgacggggtcatccgcgcgccgggcgagaacgagcgctatttcgcgctgaccaag
gtcgagaagatcaatttcgaggatcccgagaaggcgcgccacaaggtggccttcgacaac
ctgacgccgctttatcccgacgagcggctgaagatggagatcgaggatccgaccatccgc
gaccgcagcgcccggatcatcgacctggtcgcgccgatcggcaagggccagcggtcgctg
atcgtggcgccgccgcggaccggcaagacggttctgctgcagaacatcgcccattcgatc
gagaagaaccatccggaatgctatctgatcgtcctgctgatcgacgagcgcccggaggag
gtgaccgacatgcagcgcagcgtgcgcggcgaggtcgtgtcatcgaccttcgacgagccc
gccagccggcacgtcgccgtgtccgagatggtgatcgagaaggccaagcgcttggtcgag
cataagcgagatgttgtgatcctgcttgattcgatcacaagacttggtagggccttcaac
accgtcgtgccgagctcgggcaaggttctgacgggtggcgtggatgcgaacgcgttgcag
cggcccaagcggttcttcggcgcggcgcgcaatatcgaggaaggcggcagcctgaccatc
atcgccaccgcgctgatcgataccgggtcgcgcatggacgaggtaatcttcgaggagttc
aagggcaccggcaacagcgagatcgtgctggaccgcaaggtcgccgacaagcgcgtcttc
ccggccatggacatcctgaaatccggcacgcggaaggaagagctgctggtcgacagcaag
gacctgcagaagacctatctgctgcggcggatcctgaacccgatgggcacgaccgatgcg
gtcgagttcctgatctcgaaactgaagcagaccaagagcaattccgagttcttcgattcg
atgaacgcctga
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