Paracoccus aestuarii: JHW48_00740
Help
Entry
JHW48_00740 CDS
T08926
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW48_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_00740
Enzymes [BR:
paex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JHW48_00740
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHW48_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF1932
Motif
Other DBs
NCBI-ProteinID:
WCQ99330
LinkDB
All DBs
Position
150587..152008
Genome browser
AA seq
473 aa
AA seq
DB search
MIRVTLPRFGRFDAWRAAARDLASARIAPQDVTWADPDTPPDLFGADPAPPPGDHPVTAT
RDFLQLARQVASHSDPERWSLIYAALMRAQADRRFLSNPADPMLDRMTRMAKSVRRDIHK
MHAFVRFHELPSEGPRRAFGAWFEPEHPILEAGTPFFAKRFADMDWLIATPEGTARFAGG
AIAYDDPAPRPDLPDDASHGLWQTYFANIFNPARIKTQAMRSEMPKKYWKNLPETRLIPE
MLSDAPRRVQAMREAGATEAPAFAPKVTARIRQAPDNSPPQTLDQAAAQAARCTRCELCH
AATQTVWGRGDPAASLMMVGEAPGDQEDLAGRAFVGPAGQLLERTMAEAGLSPDRAWMTN
AVKHFRFTPRGKRRLHQSPDRSHVDQCRWWLEQERRLITPRLTLALGATAAQALTGNRAP
LTPRRGRVETAFDGGPVLITWHPSLILRLPPDRAPAALEELRGDLAQAARMVA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatccgggtcacgctgccccgctttggccgtttcgacgcctggcgggcggcggcgcgc
gatcttgccagcgcccgcatcgcgccccaggacgtgacctgggccgatccggacacgccg
cccgacctgttcggcgccgatcccgcgccgccgccgggcgatcacccggtcaccgccacc
cgggatttcctgcagcttgcccgccaggtcgccagccattccgaccccgaacgctggtcg
ctgatctatgcggccttgatgcgggcgcaggcggatcggcggttcctgtcgaaccccgcc
gatccgatgctggaccggatgacgcgcatggcgaaatcggtgcggcgcgacatccacaag
atgcatgccttcgtgcggttccacgaactgccctcggaggggccgcgccgggccttcggg
gcttggttcgagcccgaacatcccatcctggaggcgggcacgcccttctttgccaagcgc
ttcgccgacatggactggctgatcgcgacgcccgagggcacggcacgctttgccggcggg
gccatcgcctatgacgatccggccccgcgccccgacctgcccgatgatgccagccacggc
ctgtggcagacctatttcgccaatatcttcaacccggcgcgcatcaagacccaagcgatg
cggtccgagatgcccaagaaatactggaagaacctgcccgagacgcggctgatccccgag
atgctgtccgacgccccccgccgcgtccaggccatgcgcgaggcgggcgcgaccgaggcc
ccggcctttgcccccaaggtcaccgcccgcatccgccaagcccccgataacagcccgccg
cagacgctggaccaagccgccgcgcaggccgcgcgctgcacgcgctgcgaattgtgccat
gccgcgacccagaccgtctggggccggggcgatcccgcggcatccctgatgatggtgggc
gaggcgccgggcgaccaggaggatctggccgggcgcgctttcgtggggcccgccgggcag
cttctagaacgcaccatggccgaggccgggctgtcccccgaccgcgcctggatgaccaat
gcggtcaagcatttccgcttcaccccccgcggcaagcggcgtttgcaccagtcgcccgac
cgcagccatgtggatcagtgccgctggtggctggaacaggaacgtcgcctgatcacgccg
cgcctgaccttggccttgggcgcgacggcggcgcaggcgctgaccggcaatcgcgccccc
ctgaccccgcgccggggcagggtcgagaccgcattcgacggcggcccggtcctgatcacc
tggcatcccagcctgatcctgcgcctgccgccggaccgcgcgcccgcggcgctggaggag
ctgcgcggcgatctggcgcaggcggcgcggatggtggcctga
DBGET
integrated database retrieval system