Paracoccus aestuarii: JHW48_03610
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Entry
JHW48_03610 CDS
T08926
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JHW48_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paex03021
]
JHW48_03610
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_03610
Enzymes [BR:
paex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JHW48_03610
Transcription machinery [BR:
paex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JHW48_03610
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JHW48_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
WCQ99830
LinkDB
All DBs
Position
702068..703084
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLVVKPGADATRTATLVAEPLERGFGLTLGNALRRVLMSSLQGGAIT
AVQIDNVLHEFSSVAGVREDVTDIVLNLKGVTLKMDVEGPKRLTLSAKGPGEVKASDIQE
TAGITVLNRDHVICHLDDGAELNMELTVQTGKGYVAADKNRPEDAPIGLIPIDAIFSPVK
RVSYEVQPTREGQVLDYDKLTMKIETDGSLTPEDAVAYAARIVQDQLSVFVNFDEPESAT
RQDSDDGLEFDPRLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVVDWPPENIEDLAKRFDDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggccgaactgatcaagccgacccagctggtcgtcaagccgggc
gccgacgcgacccgcaccgcgaccctggtcgcggagccgctggagcggggcttcggcctg
acgcttggcaacgcgctgcgccgcgtgctgatgtcgtcgctgcagggcggtgccatcacc
gccgtccagatcgacaatgtcctgcatgaattcagcagcgtcgccggcgtccgcgaggac
gtgaccgacatcgttctgaacctgaagggcgtcaccctgaagatggatgtcgaaggcccc
aagcgcctgaccctgtccgccaagggtccgggcgaggtcaaggccagcgacatccaggaa
acggccggcatcaccgtgctgaaccgcgaccacgtcatatgccacctggacgacggcgcc
gagctgaacatggaactgaccgtgcagacgggcaagggctatgtcgccgccgacaagaac
cgccccgaggatgcgcccatcggcctgattccgatcgacgcgatcttctcgccggtcaag
cgcgtcagctacgaggttcagccgacccgcgagggccaggtgctggattacgacaagctg
acgatgaagatcgagacggacggctcgctgacccccgaggacgccgtggcctatgccgcg
cgcatcgtccaggaccagctgtcggtcttcgtgaacttcgacgaacccgaatcggcgacc
cgccaggacagcgacgacgggctggaattcgacccgcgcctgctgaaaaaggtcgacgag
ctggagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggccgagatgctgcggaccccgaactttggccgcaagtcc
ttgaacgagatcaaggaagtgctgtcgggcatgggactgcacctgggcatggatgtggtc
gactggccgccggagaacatcgaggacctggccaagcgtttcgacgaccagttctga
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