KEGG   Paracoccus aestuarii: JHW48_06400
Entry
JHW48_06400       CDS       T08926                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
paex  Paracoccus aestuarii
Pathway
paex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JHW48_06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paex03019]
    JHW48_06400
Messenger RNA biogenesis [BR:paex03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JHW48_06400
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WCR00305
LinkDB
Position
1247805..1249481
AA seq 558 aa
MAERLIYLPLGGAGEIGMNAYVYGHGAPGKERLILVDLGVTFGDMEGSPGIDLIMPDLTW
LEKNRHRLEAIFVTHGHEDHIGAIAHLWKRLDVPIYARRFTGTLVRLKMEEHGLPAEAVT
IVEPRPEIVKAGPFSVQFMPISHSIPESSALIIDSPAGRIVHTGDFKMDVTPVVGDAFDA
IGLSEIAAEGKGVKILACDSTNIFSTHPGRSEAVLATPILEWVMAQKNLVVATTFASNIA
RLKTLADAARASGRKICLLGRAMRRMVSVGFDTGILKDFPETIGPEEAAKLPRNKVMLLV
TGSQGERRAASAQLSRGRYLGLSLQEGDSFLFSSKTIPGNEKSVGRIMNALSESGVDVWD
ADDGLYHVSGHANRPDIEAMHDLLKPRVVIPMHGEHLHLREHALLARAKGMTAEVVTNGT
MLDLTGDKPKVVDHVETGRLYLDGNQLIGAMDGVVRDRIRMALNGHAMISVIVDEDDNVL
PDAWVELMGLPTRTRSGGELSGQIESELSEFLERADGRTVRDDGKLDEAIRKITRQVAME
EIGKKPEVTVIISRLMAD
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggctgagcgcctgatctacctgcccctgggcggcgcgggtgaaattggaatgaacgcc
tatgtctatgggcatggcgcgccgggcaaggaacgcctgatcctggtggatctgggcgtg
accttcggcgacatggagggcagcccggggatcgacctgatcatgcccgacctgacctgg
ctggaaaagaaccgccaccggctggaggcgatcttcgtcacccatggccacgaggatcat
atcggcgccatcgcgcatctgtggaagcggctggatgtgccgatctatgcgcgccgcttc
accggcacgctggtgcgcctgaagatggaggagcacggcctgcccgccgaggccgttacc
atcgtcgagccgcgccccgagatcgtcaaggccgggccgttctcggtccagttcatgccg
atcagccattcgatcccggaaagcagcgcgctgatcatcgacagccccgcgggccggatc
gtgcatacgggcgatttcaagatggacgtgaccccggtcgtgggcgacgccttcgacgcg
atcggcctgtccgagatcgccgccgagggcaagggcgtcaagatcctggcctgcgacagc
acgaacatcttctcgacccatcccggccggtccgaggccgtgctggccacgccaatcctg
gaatgggtgatggcgcagaagaacttggtcgtcgccacgaccttcgccagcaacatcgcg
cggctgaagacactggccgatgcggcccgcgcctcgggtcgcaagatctgcctgttgggc
cgggcgatgcggcgcatggtcagcgtgggcttcgacacgggcatcctgaaggatttcccc
gagacgataggcccagaggaggcggccaagctgccccgcaacaaggtcatgctgctggtc
accggcagccagggcgaacgccgcgccgccagcgcgcagctgtcgcgcggccgctatctg
gggctgtcgctgcaggagggggacagcttcctcttcagctccaagaccattccgggcaac
gagaagtcggtcggccggatcatgaacgcactgagcgaatccggggtcgatgtgtgggat
gccgatgacggcctctatcacgtgtcgggccatgcgaaccgccccgatatcgaggcgatg
catgacctgctgaagccgcgcgtcgtgatcccgatgcatggcgagcatctgcatctgcgc
gagcatgcgctgctggcccgcgccaaggggatgaccgccgaggtggtgacgaacggcacg
atgctggacctgaccggcgacaagcccaaggtcgtggatcatgtcgagaccgggcggctc
tatctggacggcaaccagctgatcggtgcgatggacggtgtggtccgtgaccgcatccgc
atggcgctgaacgggcatgcgatgatcagcgtgatcgtggacgaggacgacaacgtcctg
cccgatgcctgggtcgagctgatgggcctgcccacccgcacccggtcgggcggcgagctg
tcgggccagatcgaatccgagctgtccgagttcctggagcgcgcggatggccgcacggtc
cgcgacgacggcaagctggacgaggcgatccgcaagatcacccgtcaggtggcgatggag
gagatcggcaagaagcccgaggtcaccgtcatcatcagccgcctgatggccgactga

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