Paracoccus aestuarii: JHW48_07545
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Entry
JHW48_07545 CDS
T08926
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paex
Paracoccus aestuarii
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paex03016
]
JHW48_07545 (rnd)
Enzymes [BR:
paex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JHW48_07545 (rnd)
Transfer RNA biogenesis [BR:
paex03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JHW48_07545 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Sf6_terminase
Motif
Other DBs
NCBI-ProteinID:
WCR00700
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All DBs
Position
1474746..1475915
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AA seq
389 aa
AA seq
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MPTITRTEDLARFCEAAKSAPYVTVDTEFLRERTYWSKLCLIQLAVPPASTTRDAGGEAV
LVDPLAEGLSLEPLYDLFRHTGTVKVFHAARQDLEIFHHDAGIFPTPMFDTQVAAMVCGF
GEQVGYETLVRKIAKANLDKSSRFTDWSRRPLSDAQAAYALADVTHLRVIYEFLSAELRK
TGREAWLAEEMAVLTDPETYITRPEEAWMKVRTRTNSPRFLAILRELARFRESYAQARDI
PRSRVYKDDAMIELASTKPQNEGDLGKSRLLLREARKGDIAAGILAAVKAGLEARDLPQP
RNDEPGKPGNAALSDLLRVLLKAKADAAGVAPKLIASSADLDAIATGERDLPALQGWRAE
VFGQDALRLADGQIALSAKGGAVRVVPAG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atccccaccatcacccgcaccgaagacctggcccgtttctgcgaggccgcgaaatccgcc
ccctatgtcaccgtcgacacggaattcctgcgcgagcggacctattggtccaagctgtgc
ctgatccagctggccgtgccgcccgcatcgacgacccgcgacgccgggggcgaggccgtg
ctggtcgatcccctagccgaggggctgtcgctggaaccgctctatgacctgttccgccat
accggcacggtcaaggtcttccatgccgcgcgccaggacctggagatctttcaccacgac
gcgggcatctttcccacgcccatgttcgacacccaggtcgcggcgatggtctgcggcttt
ggcgaacaggtcgggtatgagaccctggtccgcaagattgccaaggcgaacctggacaag
tcctcgcgcttcaccgactggtcgcgccggccgctctcggatgcccaggccgcctatgcg
ctggccgatgtgacgcatctgcgggtgatctatgaattcctgtcggccgagctgaggaag
accgggcgcgaggcctggctggccgaggagatggccgtcctgaccgaccccgagacctat
atcacccgcccggaggaggcctggatgaaggtgcgcacccgcaccaattcgccgcgcttc
ctggcgatcctgcgggaactggcgcggttccgggaatcctatgcccaggcccgcgacatc
ccccggtcgcgcgtctacaaggatgacgcgatgatcgagctggcctcgaccaagccgcag
aacgagggcgatctgggcaagtcccgcctgctgctgcgcgaggcccgcaagggcgatatc
gccgccggcatcctggccgccgtcaaggccgggctggaggcgcgcgacctgccccagccc
cgcaatgacgaaccgggcaagccgggcaatgccgccctgtcggacctgctgcgcgtgctg
ctgaaggccaaggccgatgcggcgggggtggcgcccaagctgatcgcctcatctgcggat
ctggatgcgatcgccacgggcgaacgcgacctgcccgcgctgcagggctggcgggccgag
gtcttcggccaggacgcgctgcggctggcggatggccagatcgcgctgtcggccaagggc
ggtgccgtccgggtcgttccggcgggctga
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