Paracoccus aestuarii: JHW48_08200
Help
Entry
JHW48_08200 CDS
T08926
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03030
DNA replication
paex03430
Mismatch repair
paex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW48_08200
03430 Mismatch repair
JHW48_08200
03440 Homologous recombination
JHW48_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paex03032
]
JHW48_08200
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_08200
Enzymes [BR:
paex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW48_08200
DNA replication proteins [BR:
paex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHW48_08200
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHW48_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
PAS_4
PAS
Motif
Other DBs
NCBI-ProteinID:
WCQ97963
LinkDB
All DBs
Position
1600190..1602097
Genome browser
AA seq
635 aa
AA seq
DB search
MSLRLRILAMFAAVLAAALAVAGAGLWRASAGGVDALVQGGMLAGFGLAGLMTGLWYLFD
RNLARPIERLAGALRTGHLPDAAEARHLADLGPAAHDAALARQRSDEALARALQDHAAEL
AREKAGLESILADFGAGAVMADAQGRVIFYNASAARLLPGLALDRALDRHLQTGALVAAR
QRLAAGAAATDLTCLTAQGMRLSGRLRAMTGQDEGGLLLILRDRAVERPAPRQTLEALRR
HAATLVPMLDALDGPIPEALAQAIRAEGQGLAQATRHLSQILASDAPAATASLAELGAGL
RMEESPPVILAVDAAAVNALLLALDARLRDAGLDPVLRVRPDQGDQLGLLLEWQGAPVPI
DRLESWLTDAPDPGQPTTSGAEILAIHGTGIWPETEGATARLVMPLTMAPDAQEGAGVTY
DFALAGRGAASSRLADLTCVVFDTETTGLTDRDRIVQIAGLRLARGRLTGERFETLVNPG
RPIPPASTAIHGITDAMVADAPDLAAALTAFQHFCDDAVLVAHNAPFDMGFLRRAQAETG
ARFDNRVLDTVALSAMIWGQSAVHSLDALTERLGITIPAEARHTAMGDTIATAEAFLRLV
PALEAKGITLFEEALIQARRHRRLIADANLLDPAR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcctgcgcatcctggcgatgttcgcggccgtgctggcggcggcgctggcc
gtggcgggcgcggggctgtggcgcgcctcggccgggggggtggatgcgctggtccagggg
gggatgctggcgggcttcggtctggccgggctgatgacggggctgtggtatctgttcgac
cgcaacctggcccgcccgatcgagcggctggcgggggcgctgcgcaccgggcatctgccc
gacgcggccgaggcgcgccatctggccgatctgggccccgccgcccatgacgcggccttg
gcccggcaacgctcggacgaggcgctagcccgcgcgcttcaggaccacgcggccgagctg
gcgcgcgaaaaggcggggctggaatccatcttggccgatttcggcgcgggcgcggtcatg
gccgatgcgcaggggcgggtgatcttctacaatgccagcgcggcgcggctgctgccgggt
ctggcgctggaccgggcgctggaccggcatctgcaaacgggggcgctggtcgcggcgcgt
cagcggctggcggcgggggctgcggccacggacctgacctgcctgaccgcgcaggggatg
cgcctgtcgggtcggctgcgtgcgatgaccggccaggacgagggcgggttgctgctgatc
ctgcgcgaccgggcggtggaacggcccgcgccgcgccagacgctggaggcgctgcgccgt
cacgctgccaccttggtgcccatgctggacgcgctggacggccccatccccgaggccctg
gcccaggccatccgcgccgaggggcagggcctggcccaggccacgcggcacctgtcccag
atcctggccagcgacgcgcccgcggccaccgcatccctggccgagctgggcgcgggcctg
cggatggaggagtcgccccccgtcatcctggcggtggatgcggcggcggtgaacgcgctg
ctgctggcgctggatgcgcggctgcgcgatgcgggcctggatccggtcctgcgggtgcgg
cccgaccaaggcgatcagctgggcctgcttctggaatggcagggcgcgcccgtgcccatc
gaccggctggaatcctggctgaccgacgcgcccgatccgggccagcccaccacctccggg
gccgagatcctggccatccacggcaccggcatctggcccgaaaccgagggcgcgaccgcc
cgcttggtcatgcccctgaccatggcccccgacgcgcaggagggggcgggcgtcacctat
gacttcgcgctggcggggcggggcgcggcctcgtcgcggctggccgatctgacctgtgtg
gtcttcgacaccgagacgacgggcctgaccgaccgcgaccgcatcgtgcagatcgccggg
ctgcggctggcccgcggccggctgaccggcgagcggttcgagacgctggtcaatcccggc
cgcccgatcccgcccgcctcgaccgcgatccacgggatcaccgatgcgatggtggctgat
gccccggacctggcggccgcgctgacggccttccagcatttctgcgacgatgcggtgctg
gtcgcgcataacgcgcccttcgacatgggcttcctgcgccgcgcccaggccgagaccggg
gcgcgtttcgacaaccgggtgctggacacggtggccctgtcagcgatgatctggggccag
tcggcggtccattcgctggatgcgctgaccgaacggctcggcatcaccatcccggccgag
gcgcgccataccgcaatgggcgacaccatcgccacggccgaggctttcctgcgcctggtc
cccgcgctggaggccaagggcatcaccctgttcgaggaggcgctgattcaggcgcgccgc
caccgccgcctgatcgcggacgcgaacctgctggatcccgcgcgctag
DBGET
integrated database retrieval system
