Paracoccus aestuarii: JHW48_09170
Help
Entry
JHW48_09170 CDS
T08926
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
paex
Paracoccus aestuarii
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paex01002
]
JHW48_09170
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paex01011
]
JHW48_09170
Peptidases and inhibitors [BR:
paex01002
]
Cysteine peptidases
Family C82
JHW48_09170
Peptidoglycan biosynthesis and degradation proteins [BR:
paex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JHW48_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WCQ98128
LinkDB
All DBs
Position
complement(1796705..1798345)
Genome browser
AA seq
546 aa
AA seq
DB search
MKRITAVLGMALMLSGGVAHAAPAAGGAVNPAPRLEFSDRQMALALAVAGDSDLAAFYGE
NGLQPVFTGPDAALRRAALLAAIAEAPRDGIPSARYAPDRLAALGDSPQAELAHARELAR
LLRDLTGGVLEPGRIDPEIKRQPDRSAVPALMTAFAHQDDPAAVLRAAAPDHPAYRRLQQ
ALAGPAHLTIPAHLPPVPSGVWRAGMRDPAVAALRARLEGAGFAAPSTQPDLHDDDLAQA
TMAFQRAAGLPPDGVAGPRTLGLLNGDAAQGGDARQRAIILALERLRWMGDADLSARHVW
VNIPEFATAIVEDGHEVFRTRSVVGKDTPEMRTPEFSEMMPNIVVNPSWNVPRSITIRDY
LPRLQANRHALSHLDVLDRSGRVLARDGIDFSGYTAANFPFRLRQKPSDDNALGIVKFIF
PNPWNIYLHDTPSKSLFGNRVRAASNGCIRIGDPVDLAHALLSRQTDNPAAIFQRARDSG
RETWLRLTPSVPVHLVYFTAWPGPDGSIRLHDDIYGRDARLWQALQAEGRGPAAGSDVMA
DAPASP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggatcacggcggttctgggtatggcgctgatgctgagcggaggggtggcgcat
gccgcgcccgccgctggcggagccgtgaacccggcgccgcggctggaattctcggaccgg
cagatggcgctggccttggcggtggcgggtgattccgacctggcggccttctatggcgaa
aacgggttgcagcccgtcttcaccggtcccgacgccgccttgcgccgcgcggccctgctg
gccgccatcgccgaggcgccccgcgatggcatcccctcggcccgctatgcgcccgatcgg
ctggcggccttgggcgacagcccccaggccgagctggcccatgcgcgcgagctggcccgc
ctgctgcgcgacctgacgggcggcgtgctggagccggggcgcatcgaccccgagatcaag
cgccagcccgatcgcagcgcggtgcccgcgctgatgaccgcctttgcgcatcaggacgat
ccggccgcggtactgcgtgcggccgcgcccgatcaccccgcctatcgccgcctgcagcag
gccttggcggggccggcgcatctgaccattcccgctcatctgccgcccgtgccctccggc
gtctggcgcgcggggatgcgcgatccggccgtcgccgccctgcgcgcccggctggagggg
gcgggctttgccgcgccctcgacccagcccgatcttcatgacgatgatctggcccaggcc
accatggcgttccagcgcgcggccggtctgccgccggacggggtggcggggccgcgcacg
ctcggcctgctgaacggggacgcggcgcagggcggggatgcccgtcagcgcgccatcatc
ctggccttggagcggttgcgctggatgggggatgccgatctctcggcgcgccatgtctgg
gtgaacatccccgaattcgcgacggccatcgtcgaggacgggcacgaggtcttccgcacc
cgcagcgtcgtgggcaaggacacgcccgagatgcgcacgcccgaattctcggagatgatg
cccaacatcgtcgtcaatcccagctggaacgtgccgcggtcgatcaccatccgcgactat
ctgccccggctgcaggcgaaccggcatgcgctgtcgcatctggacgtgctggaccggtcg
ggccgggtgctggcgcgcgacgggatcgacttctctggctacacggcggcgaatttcccc
ttccgcctgcgccagaagccgagcgacgacaatgccttgggcatcgtcaagttcatcttt
ccgaacccctggaacatctatctgcacgacacgcccagcaagtcgctgttcggcaaccgg
gtcagggccgcgtcgaatggctgcatccgcatcggcgacccggtcgacctggcccatgcg
ctgctgtcgcgccagaccgacaatccggcggcgatattccagcgtgcgcgcgacagcggg
cgcgagacctggctgcggctgacgccgtctgtcccggtgcatctggtctatttcaccgcc
tggccggggccggacgggtcgatccggctgcatgacgacatctatggccgagacgcgcgc
ctgtggcaggcgctgcaggccgagggtcggggaccggcggcgggatcggacgtgatggcc
gacgcccctgcgtcaccctag
DBGET
integrated database retrieval system
