Paracoccus aestuarii: JHW48_11170
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Entry
JHW48_11170 CDS
T08926
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03030
DNA replication
paex03430
Mismatch repair
paex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW48_11170
03430 Mismatch repair
JHW48_11170
03440 Homologous recombination
JHW48_11170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paex03032
]
JHW48_11170
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_11170
Enzymes [BR:
paex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW48_11170
DNA replication proteins [BR:
paex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHW48_11170
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHW48_11170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_14
PIF1
AAA_16
Glyco_tranf_2_5
Rad17
AAA_18
DUF815
AAA_24
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
WCQ98470
LinkDB
All DBs
Position
2202649..2204433
Genome browser
AA seq
594 aa
AA seq
DB search
MTDTTSAYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTA
RIIAKGMNCIGPDGQGGPTTEPCGICEHCLAIAEGRHVDVMEMDAASRTGVGDIREIIES
VHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRC
QRFDLRRIEPEVMIALLQRIAAAEGATITDDALALITRAAEGSARDATSLLDQSISHGAG
ETTADQVRAMLGLADRGRVLDLFEMIMRGDAASALAELQSQYADGADPVAVLRDLAEVTH
WISVVKITPDALEDPTISPDERARGRDLADRLPMRVMSRMWQLLLKALEEVSAAPNAMMA
AEMAVIRLTHVADLPDPEALIRRVQQAQTAGEFARGPAVAGAQTSSQPQASRRARPAPAV
QAQAGTAAALAAAPEVVEGFPDFASVVDLIARMRDMTLLVLVERHVALVRYSPGRIEFQP
RDNPPADLAQRLAERLRGWTNGQRWAVTVTNEDGAPTIAETREAAARAARDRALALPIVQ
QVLAAFPDATLTGVTRAAPPPEPRIEAEGAQNPHDGTEGPVAEVEEWDPFEDED
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacttccgcatatcaggttctggcccggaaataccggcccgagaccttc
gccgacctggtgggccaggatgcgatggtccgcacgctgaagaacgccttcgccgccgac
cgcatcgcccaggccttcatcatgacgggcatccgcggcaccggcaagacgaccaccgcg
cgcatcatcgccaagggcatgaactgcatcggccccgacggccagggcggccccaccacc
gaaccctgcggcatctgcgagcattgcttggccatcgccgagggccgccatgtcgatgtg
atggagatggacgccgcatcgcgcaccggcgtgggcgacatccgcgagatcatcgaatcg
gtgcattaccgggcggcatcggcgcgctacaagatctacatcatcgacgaggtccacatg
ctgtcgaccagcgcgttcaacgcgctgctgaagacgctggaggagccgcctccgcatgtg
aaattcatcttcgccacgaccgagatccgcaaggttcccgttaccgtcctgtcgcgctgc
cagcggttcgacctgcgccggatcgagcccgaggtgatgatcgccctgctgcagcggatc
gccgcggccgagggcgcgaccatcaccgatgatgcgctggcgctgatcacgcgggcggcc
gaagggtcggcccgcgacgcgaccagcctgctggaccagtcgatcagccatggcgcgggc
gagaccaccgccgatcaggtccgcgccatgctgggcctggcggatcggggccgggtgctg
gacctgttcgagatgatcatgcgcggcgacgccgccagcgccttggccgaactgcaatcc
caatatgccgacggggccgatcccgtggccgtgctgcgcgacctggccgaggtcacgcat
tggatctcggtcgtcaagatcacgccggacgcgctggaggatccgacgatctcgcccgac
gaacgcgcgcgcgggcgggacctggccgaccggctgccgatgcgggtcatgtcgcggatg
tggcagctgctgctgaaggcgctggaggaggtgtccgccgcgcccaacgcgatgatggcg
gccgagatggcggtgatccggctgacccatgtcgccgacctgcccgaccccgaggcgctg
atccgccgcgtccagcaggcgcagacggcaggcgaattcgcccgcggccccgcggtggcg
ggcgcgcagacctcgtcgcagccgcaggcgtcgcgccgcgcccgcccggcaccggcggtg
caggcccaggccgggaccgccgccgcgctggccgcggcccccgaggtggtcgagggcttt
cccgacttcgcctcggtcgtggacctgatcgcgcggatgcgggacatgacgctgttggtg
ctggtcgaacgccatgtcgcgctggtccgctacagccccggccggatcgagttccagccc
cgcgacaacccgcccgccgatctggcgcagcgcctggccgaacggctgcgcggctggacg
aacggccagcgttgggcggtgaccgtcaccaacgaggacggcgcccccaccatcgccgag
acgcgcgaggccgcggcccgcgccgcccgcgaccgcgccctggccctgcccatcgtgcag
caggtgctggcggcattccccgacgccacgctgaccggcgtcacccgcgccgccccgccc
cccgaaccccggatcgaggccgagggcgcgcagaacccccatgacggaaccgaaggcccg
gtggccgaggttgaggaatgggaccccttcgaggatgaggactga
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