Paracoccus aestuarii: JHW48_15090
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Entry
JHW48_15090 CDS
T08926
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHW48_15090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paex03019
]
JHW48_15090 (recQ)
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_15090 (recQ)
Enzymes [BR:
paex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHW48_15090 (recQ)
Messenger RNA biogenesis [BR:
paex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JHW48_15090 (recQ)
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JHW48_15090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCQ99132
LinkDB
All DBs
Position
complement(2990106..2992157)
Genome browser
AA seq
683 aa
AA seq
DB search
MARDLTTGDLLRQVWGFDGFRPGQEEVVDAVAQGRDVLAIMPTGGGKSLCFQLPALMRDG
VTVVISPLIALMRDQVRALREAGVEAGALTSGNTEAETEAVFAAIADGRMKVLYMAPERL
ASGGTVTLLRRAGVTAIAVDEAHCVSQWGHDFRPDYLRIGDLKRTLGVPLAAFTATADVE
TRAEIVTRLFDGQPPVTFLRGFDRPNIRLAFQPKNSPRTQVLTYAAARRGQSGIVYCGAR
ARTETLAQALREAGHPAIAYHAGLEAEARREAEARFQTEDGLIVVATVAFGMGIDKPDIR
WVLHADLPKSIEGYYQEIGRAGRDGDPADTLTLYGPDDIRLRRTQIDEGLGDVARKAGDH
ARLNALLGLAEATGCRRRRLLAYFGEEMAEDCGNCDLCQTPPKLFDGTLAVRKALSAMVR
TGEWFGAGHLIDILTGTTTDKVRERGHDQLPTFGVGREHGRGQWQAIFRQMMGLDLCRPD
PERHGALHLTETAHPILRGEEPVTLREDTTKGAKPANVLRTQVSEEDEPLLSALKARRRA
LAEAARVPAYVIFPDRTLIEMAEKRPQDMDQMARIGGVGAKKLDSFGAAFLEVIAGAQPE
MHPARRALAGRPAGALFDDLMQIQLDLQRGADGTEKPLSCSTAQIRRIAEARPAGMDALA
RHLDQPRLDRFGAAFLDRIAQAD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgacctgacaaccggcgacctgctgcgtcaggtctggggcttcgacgggttc
cgtccgggccaggaagaggtcgtggatgcggtggcccaaggccgcgacgtgctggcgatc
atgccgaccggcgggggcaagtcgctgtgcttccagctgcccgcgctgatgcgcgacggc
gtgacggttgtcatatccccgctgatcgcgctgatgcgcgaccaggtgcgcgcgctgcgc
gaggcgggggtcgaggcgggcgccctgaccagcggcaataccgaggccgagacggaggcg
gtctttgccgccatcgcggacgggcggatgaaggtgctgtatatggcgccggaacggctg
gcctcgggcgggacggtgaccctgctgcggcgggcgggtgtgacggcgattgcggtggac
gaggcgcattgcgtcagccagtggggccatgatttccgccccgattacctgcggatcggc
gatctgaagcggacgcttggcgtgcccttggcggccttcaccgccaccgccgatgtcgag
acgcgggccgagatcgtcacgcggctgttcgacggtcagccgccggtgaccttcctgcgc
ggcttcgaccggcccaatatccgcctggccttccagcccaagaacagcccccggacacag
gtcctgacctatgcggcggcgcggcgcgggcaatcgggcatcgtctattgcggggcgcgg
gcgcggaccgagaccttggcgcaggcgctgcgcgaggcaggccatcccgccatcgcctat
cacgcggggctggaggccgaggcccggcgcgaggccgaggcgcggttccagaccgaggac
gggctgatcgtcgtggcgaccgtcgccttcggcatgggcatcgacaagcccgacatccgg
tgggtgctgcatgccgacctgccgaaatccatcgagggatattatcaggagatcgggcgt
gcgggccgtgacggcgatccggcggatacgctgacgttgtatggtcccgacgacatccgc
ctgcgccgcacccagatcgacgagggcctgggcgacgtggcccgcaaggccggagatcac
gcgcggctgaacgcgctgctgggtctggccgaggcgacgggttgtcggcggcgccgcctg
ctggcctatttcggcgaggagatggccgaggattgcggcaattgcgacctgtgccagacg
ccgcccaagctgttcgacgggacgctggcggtcaggaaggcgctgtcggccatggtgcgg
accggcgaatggttcggcgcgggccatctgatcgacatcctgaccggcaccaccaccgac
aaggtgcgcgagcgtggccatgaccagctgccgaccttcggcgtcgggcgcgaacacggg
cgcgggcagtggcaggcgatcttccggcagatgatggggctggacctctgccgccccgac
ccggaacgccacggcgccctgcatctgaccgagaccgcccatcccatcctgcgcggcgag
gaacccgtgaccctgcgcgaggacacgaccaagggcgccaagcccgccaatgtcctgcgc
acccaggtgtcggaggaggacgagccgctgctgtcggcgctgaaggcccggcggcgtgcc
ttggccgaggcggcgcgcgtgcccgcctatgtgatctttcccgaccgcaccctgatcgag
atggccgagaagcgcccgcaggacatggaccagatggcccggatcggcggcgtcggcgcc
aagaagctggacagtttcggtgcggccttcctggaggtgatcgcgggcgcgcagcctgag
atgcacccggcgcggcgggccttggcgggccggccggcgggcgcgcttttcgacgatctg
atgcagatccagctggacctgcagcgcggcgcggatggcacggaaaagccgctgtcgtgt
tcgaccgcccagatccgccgcatcgccgaggcgcgccccgccgggatggatgcgctggcc
cggcatctggaccagccgcggctggaccgcttcggcgcggcctttttggaccggatcgcg
caggcggactga
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