Paeniglutamicibacter sp. Y32M11: KUF55_00025
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Entry
KUF55_00025 CDS
T07362
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
paey
Paeniglutamicibacter sp. Y32M11
Brite
KEGG Orthology (KO) [BR:
paey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paey03032
]
KUF55_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
paey03400
]
KUF55_00025 (gyrB)
Enzymes [BR:
paey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KUF55_00025 (gyrB)
DNA replication proteins [BR:
paey03032
]
Prokaryotic type
DNA Topoisomerases
KUF55_00025 (gyrB)
DNA repair and recombination proteins [BR:
paey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KUF55_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QXQ12007
LinkDB
All DBs
Position
5645..7639
Genome browser
AA seq
664 aa
AA seq
DB search
MEHTYGAQDITVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEVVDNSVDEALAGHCDHIQI
ALRNDGGVRVEDNGRGIPVDIHPTEGKPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGIS
VVNALSERVDTEIRRQGSVWRMSFADGGKPQGTLVKGEESDATGTIQTFYPDATIFDTIE
FDFETLRARFQQMAFLNKGLRITLTDERTLVVDGDEIATDADEENDATPKHRVVDYLYKD
GLLDYVKHLNSSKKVELVHEDVIAFESEDNSKGISVEVAMQWTNSYSESVHTYANTINTH
EGGTHEEGFRAAMTSLINRYAREKTILREKDENLTGDDIREGLTAVISVKLAEPQFEGQT
KTKLGNSMAKGFVQGVVNEELGDWLERNPTTARDIIRKAQLASQARMAARKARDNARRKS
PLESFGMPGKLSDCSSKNPSECEVFIVEGDSAGGSAKRGRNPHTQAILPLRGKILNVERA
RLDRALGNAEVQAMITAFGTGIGEEFDMAKLRYHKIVLMADADVDGQHITTLLLTLLFRF
MRPLIENGYVYLAQPPLYRIKWSNAAHEYVYSDKERDDALTTGAAKNKRLPKDNGIQRYK
GLGEMDYSELWDTTMDPEHRTLRQITMDDAAAADQIFSVLMGEDVESRRNFIQQNAKDVR
FLDI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtggaacacacttacggcgcgcaggacatcacggttcttgagggcctcgaagcggtgcgt
aagcgccccggcatgtacatcggatccacctcgtctcgaggacttcaccacctggtttat
gaggtcgtggataactccgttgatgaggcgctggctggccactgcgatcacatccaaatt
gccctgcgcaacgacggtggtgtgcgcgttgaagataacggccgtggcatccccgtggac
attcaccccaccgagggcaagcccacggtcgaagtcgtcatgaccatcctgcacgccggt
ggtaagttcggcggcggcggttacgccgtctccggtggcctacacggcgtgggcatctcc
gttgttaacgcgctctccgagcgtgtggacaccgagatccgccgccagggcagcgtctgg
cggatgtccttcgccgatggcggcaagcctcagggcaccctggtcaagggcgaagagtcc
gatgccacgggtaccatccagacgttctaccccgacgccacgatcttcgacaccattgag
ttcgactttgagacgctgcgcgcgcgcttccagcagatggcgttcctgaacaagggactg
cgcatcacgctcaccgacgagcgcaccctggtggtcgacggtgatgagatcgccacggac
gccgacgaggaaaacgacgctaccccgaagcaccgcgtcgtggattacctctacaaggac
gggctgctggactacgtcaagcacctgaactcctccaagaaggttgaactcgttcacgag
gacgtcatcgccttcgaatcggaggataactccaagggcatcagcgttgaggtggccatg
cagtggaccaactcgtactccgagtcggtgcacacctacgccaacaccatcaacacccat
gagggcggtacccacgaagagggtttccgcgccgcaatgacctcgctgatcaaccgctat
gcgcgtgagaagacgatccttcgtgaaaaggatgagaacctcaccggtgatgacatccgt
gagggtctgaccgctgtcatctcggtcaagctcgccgaaccacagttcgaggggcagacc
aagacgaagctcggcaactcgatggccaagggctttgtgcagggtgtggtcaacgaggaa
ctcggcgactggctcgagcgcaaccccaccaccgcccgcgacatcattcgcaaggctcag
ctggcctcgcaggctcgcatggccgcacgcaaggcacgggacaacgcccgccgcaagtcc
ccactggaatccttcggcatgccgggcaagctctcggactgctcctcgaagaacccttcc
gagtgcgaagttttcatcgtggagggagactccgcaggcggctcggccaagcgcggacga
aacccgcacacccaggccatcctgccgctgcgcggcaagatcttgaacgtggagcgtgca
cgccttgatcgcgcgctgggcaatgctgaggtccaggcgatgattaccgccttcggcacc
ggtattggtgaagaattcgacatggccaagctgcggtaccacaagatcgtgctgatggcc
gatgccgacgttgatggccagcacatcaccacgttgctgctgaccctgctcttccgcttc
atgcgcccgttgatcgaaaacggctacgtttacctggcgcagccgccgctgtaccgcatc
aagtggtcaaatgccgcccacgaatacgtgtattcggacaaggaacgcgacgacgctcta
accaccggtgcagcgaagaacaagcgcctgcccaaggacaacggcatccagcgttacaag
ggtctgggcgagatggattactcggaactctgggacaccaccatggatccggaacaccgc
acgctgcgtcagatcaccatggatgatgccgccgccgccgaccagattttctccgtcctg
atgggcgaggacgtcgaatcgcgtcgaaacttcatccagcaaaatgccaaggacgtgcgc
ttcttggacatctag
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