Paeniglutamicibacter sp. Y32M11: KUF55_07915
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Entry
KUF55_07915 CDS
T07362
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
paey
Paeniglutamicibacter sp. Y32M11
Pathway
paey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUF55_07915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paey03019
]
KUF55_07915
03009 Ribosome biogenesis [BR:
paey03009
]
KUF55_07915
Enzymes [BR:
paey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KUF55_07915
Messenger RNA biogenesis [BR:
paey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KUF55_07915
Ribosome biogenesis [BR:
paey03009
]
Prokaryotic type
rRNA processing factors
KUF55_07915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QXQ11787
LinkDB
All DBs
Position
1802282..1805683
Genome browser
AA seq
1133 aa
AA seq
DB search
MALNRDESKAAMGQGPKARTRTSRPRKNFNEQPPASVPVRRAMTLADLDNAAAAPSRTRA
NVAPRNATARRGADNRNAPAKRAAEATVESVAAAASGEVTNAPASRSAKAAVQAPVLTET
KTAVAKAPARRGPRRATSGVTSPGAAASEAAPAIVAPAATLAAKVHSTIESVHEAAPEQE
PAVKAGTRRPARGRSRKASAPASNAAQTAEAEAAVPVAAATEVAAENTVAEAAEPAKSSR
RRPARNSRGNRNAAPADEQVVEEQGTPVAPAAVVNETATEDVVTEPEAVTISDPFAIPES
ALSLIFQAPNLAAAVELEAAADEDAAASRRNRNAASEEESGDDSGVVSRRRRRRRRGEAD
LELSGGTENDPPNTITRVRAPRTTLEPVVSNKVTAVRGSTRLEAKRQRRRDSRESGRRRQ
VITEAEFLARRESVDRQMIVRQREDRIQIGVLEDGILAEHFVSKTQQDSLIGNVYVGKVQ
NVLPSMEAAFVDIGRGRNAVLYAGEVNWDVAGLDGHPRRIEHALKSGDTVLVQVTKDPVG
HKGARLTSQISLPGRYLVYVPGGSMTGISRKLPDVERNRLKKILKDHLPENAGVIVRTAA
EGASEEELMNDINRLRAQWEGIEAASTSTKTLAPELLYGEPDLTIKVVRDVFNEDFTKLI
VSGDDAWDTIEAYVTYVAPDLVSRLEKWESEADIFTDFRIDEQIHKALDRKVFLPSGGSL
VIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFIDM
VLESNRDLVLRRLVECLGRDRTKHQVAEVTSLGLIQMTRKRMGTGLLEVFGENCEACNGR
GVITHDEPVEHHRTFNSAGEAHAPSQRAAEKPSRAERRRRNRGSEGDSGIDSAPELSEES
PAAVPAALEAKATATRNAFANIAAAALAAHELGQVAPEDEGATLTVAGESVVVPAARRNR
RAGSETPAPSLTLETLEAALPDHSPADQAVEGDEGSESGSSRPARSRSRRKPRAKTQESA
PVVVPSPAPAAAPVISGVAGQASDEAPEQASSRTAPNKTSVSEPVARVKRSRRAMSPQGG
SDSAVSVASDTRATSGTSHVASLADQTKSPQPQKAANAPIMLGVGMPVNELKE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaatcgcgacgaatctaaggcagcgatgggccaggggccaaaggcccggacc
cgcacgtcccgcccgcgcaagaactttaacgaacaacctccggccagcgtgccggtacgc
cgggccatgacgcttgccgacctcgacaacgcggcagcggctccctcccggacccgcgcc
aacgttgccccccgcaacgccaccgctcgtcgcggagcagataaccgcaacgccccggcc
aagcgtgccgccgaggccaccgttgagtcggttgccgcagcagcatcgggcgaagtcacc
aacgccccggcaagccgttccgccaaggccgccgtacaggccccggttctcaccgagacc
aagaccgcagtagctaaggcaccggcacgtcgtggcccacgccgcgccacctccggagtg
acctccccgggtgccgcagccagcgaagcagctccggccattgtggctcccgcggcaaca
ctcgcggccaaggtgcactccaccatcgagtcggttcacgaggcagcacccgagcaggag
ccggccgtaaaggccggcacccgtcgcccggcccgcggtcgtagtcgcaaggcctccgca
ccggcatccaacgcagcgcagacggccgaggccgaagcagccgtgccggttgccgccgct
accgaggtagcagccgagaacaccgtggcggaagccgccgagccggcaaagtcctcacgc
cgccgtccggcccgcaactctcgcggtaaccgcaacgcggcacccgccgacgagcaggtc
gttgaagagcagggcaccccggtagcaccggcggccgtggtcaacgaaaccgccaccgaa
gacgtagttacggagcccgaagcggtcaccatctccgatccgttcgccatcccggaatcg
gcactctcactgatcttccaggctccgaacctggccgcggccgtggagctcgaagcggct
gccgacgaggatgccgcggcatctcgccgcaaccgcaatgccgcctccgaggaggagtcg
ggtgatgactcgggtgttgtctcgcgtcgtcgccgtcgtcggcgtcgtggcgaggccgac
ctggaactcagtggtggaaccgaaaacgatccgccaaacaccatcacccgggtccgcgcc
ccacgcaccaccctagaaccggtggtttccaacaaggtcaccgccgtgcgtggttccacc
cgcctcgaggccaagcgtcagcgccgccgcgattcccgcgagtcgggccgtcgccgtcag
gtcatcaccgaggccgaattcctggctcgccgcgaatccgttgaccgccagatgatcgtg
cgccagcgtgaagaccggatccagatcggggtgctcgaagatggcatcctggccgagcac
ttcgtctccaagacgcagcaggattcgctgatcggcaacgtctatgtcggtaaggtacag
aacgtactgccgtccatggaggccgccttcgtggatatcggacgcggacgcaatgccgtg
ctctacgccggtgaggttaattgggacgtggccggccttgacggtcacccgcgccgcatc
gagcacgcactgaagtccggggacaccgtcctggtgcaggtcaccaaggatccggtcggc
cacaagggcgcccgcctcaccagccagatctccctgccgggccgctacctggtctacgta
ccgggtggctcgatgaccggcatctcacgcaagcttcccgacgtggagcgcaaccgcctg
aagaagatcttgaaggatcacctgccggaaaatgccggagtcatcgtacgcaccgccgcc
gagggtgcttccgaagaagagttgatgaatgacatcaaccgcctgcgcgcacagtgggaa
ggcatcgaggccgcctcgacctccaccaagaccctggctccggaattgctctacggggaa
ccggatctgaccatcaaggtggtccgcgatgtcttcaacgaggacttcaccaagttgatc
gtctccggcgacgacgcctgggacaccatcgaggcctacgtgacctacgtggccccggat
ctggtttcacgcctggaaaagtgggagtcggaagcggacatcttcaccgatttccgcatc
gacgagcagatccacaaggcacttgaccgcaaggtcttcctgccctcgggtggttcgctg
gtcattgaccgcaccgaagcgatgaccgtggttgacgtgaacaccggtaagttcaccggt
tcgggcggcaacctcgaggaaaccgtcaccaagaacaacctggaggcggccgaagaggtc
gttcgccagctgcgcctgcgcgacatcggtggcatcatcgtcatcgacttcatcgacatg
gttctggaatccaaccgcgatctggtgctccgccgattggtggagtgcctgggccgcgac
cggaccaagcaccaggttgccgaggtgacctcgctggggctgatccagatgacccgtaag
cgcatgggcaccggtttgctcgaagtcttcggcgaaaactgcgaggcctgcaacggccgc
ggcgtcatcacccatgacgagccggtggaacaccaccgcacgttcaactcggccggcgaa
gcacacgccccgagccagcgcgcggccgagaagccctcgcgtgccgagcgtcgccgtcgc
aaccgtggctccgagggagactccggaatcgattcggctcccgagctcagcgaagagtcg
cccgcggcggttcccgcagcacttgaggcaaaggccaccgcaacgcgtaatgcctttgcg
aacattgccgcagcagccctggccgcccacgaattgggacaggtagcaccggaagacgag
ggtgctacgctcaccgttgcgggggagtccgtggtggttcccgccgcgcgacgtaaccgt
cgtgccggatccgagactcctgccccgtcgctgaccctggagacgctggaagcggcgctt
ccggatcattcccccgcggatcaggcagtggaaggtgacgagggaagcgaaagcggatcc
tcacgccccgcacgtagccgcagccgtcgcaagccgcgcgccaagactcaggagagcgct
ccagtggtagttccctctcctgcccccgccgcagcccccgtcatctcgggtgttgccggc
caagcctccgacgaggcgcccgaacaggcgtcaagtcgcacggcacctaacaagacttcg
gtctcagagccggtggcgcgcgtcaagcgcagccgccgtgccatgagcccgcaaggcggt
tccgattctgcagtttctgtggcatcggacacgcgagctacatcgggcacatcccatgtg
gcttcactcgctgaccaaacgaagtccccacagccgcagaaagccgcgaatgcgccgatc
atgctgggtgtagggatgccggtcaacgagttgaaagagtag
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