Paeniglutamicibacter sp. Y32M11: KUF55_08560
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Entry
KUF55_08560 CDS
T07362
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
paey
Paeniglutamicibacter sp. Y32M11
Pathway
paey03030
DNA replication
paey03430
Mismatch repair
paey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUF55_08560 (holA)
03430 Mismatch repair
KUF55_08560 (holA)
03440 Homologous recombination
KUF55_08560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paey03032
]
KUF55_08560 (holA)
03400 DNA repair and recombination proteins [BR:
paey03400
]
KUF55_08560 (holA)
Enzymes [BR:
paey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUF55_08560 (holA)
DNA replication proteins [BR:
paey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUF55_08560 (holA)
DNA repair and recombination proteins [BR:
paey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUF55_08560 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
QXQ11898
LinkDB
All DBs
Position
1949451..1950449
Genome browser
AA seq
332 aa
AA seq
DB search
MAAPRGTSKNAGISWRSVTPAPLILLQGSEELLASRAFETVRTALRGSAEIEMTRFEANS
YERGELLLASSPSLFSETKLIEIRQLGTMNEDFLNDALAYAKSPAPDATLVMHHSGGVRG
KKLLDALKAAGAIVVDCQPLKKDAEKIDFVAQEFRAAKRKLTAEGSRALVAALGSDLSEL
AAACSQLLQDTTGAVDQDVVDKYYGGRVEATGFKVADAALAGRADVALSTLRHALATGTD
PVPIVATLAMKLRQVAKVAGVRKSSGQLASELGMAPWQVQQAQEQARNWKAEDLARCIRL
VAEADAQVKGASRDPEYAVERAVMQISLAARH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccacgaggcacgtccaagaatgccggtatttcctggcggtcggtgactccg
gcaccgctgatcctcttgcaaggttccgaagagttgctcgccagccgtgccttcgaaacc
gtgcgtacggccctacgcggcagcgcggagatcgaaatgacccgctttgaagccaatagc
tacgaacgcggcgaactgcttctggcttccagcccttcgctctttagcgaaactaagctc
atcgagattcgtcagctgggcaccatgaacgaggacttcctcaatgatgcgctggcctat
gccaaatcgccggcgcccgacgccaccctggtgatgcatcacagcggtggagtacgcgga
aagaagctgcttgacgcgctcaaggctgccggggccatcgtggtggattgccagccgcta
aagaaggacgccgaaaagatcgactttgtggcccaggagtttcgtgctgcaaaacgcaag
ctcaccgccgaggggtcccgagccctggtggcagcgctaggcagtgatctctccgagttg
gctgccgcttgctcccagctgctccaggacaccaccggcgccgttgaccaggatgttgtt
gataagtattacggaggccgggttgaggccacgggattcaaggtagccgatgccgcccta
gccggacgcgcagacgttgcgttaagcaccttgcgccatgcactggccacgggtaccgac
ccggtgccgatcgttgccacgctcgccatgaagctccgtcaggtcgcgaaggtcgcaggt
gttcgtaagtcctccggacagctggccagcgaattgggtatggcgccatggcaggtccag
caggcgcaggaacaggccaggaattggaaggccgaggaccttgcccgctgtattcgtctg
gtcgccgaagccgatgcccaggtaaagggcgcatctcgcgatcccgagtacgcggtggag
cgcgcagtgatgcagatttccttggcggctcgacactaa
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