Paeniglutamicibacter sp. Y32M11: KUF55_12625
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Entry
KUF55_12625 CDS
T07362
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paey
Paeniglutamicibacter sp. Y32M11
Pathway
paey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUF55_12625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paey03019
]
KUF55_12625
03009 Ribosome biogenesis [BR:
paey03009
]
KUF55_12625
Enzymes [BR:
paey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KUF55_12625
Messenger RNA biogenesis [BR:
paey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUF55_12625
Ribosome biogenesis [BR:
paey03009
]
Prokaryotic type
rRNA helicases
KUF55_12625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Cas3-like_C_2
PBECR2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXQ12203
LinkDB
All DBs
Position
complement(2853009..2855033)
Genome browser
AA seq
674 aa
AA seq
DB search
MPETQTKSADTKTEENQILFSDLGLDGRVLAAVSDLGYEKPSPIQAATIPLLLEGRDVVG
VAQTGTGKTAAFALPALSKMAELADLNGTARKTQVLVLAPTRELALQVAEAFTSYAKHMG
DFTVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHINKGSLDLSDLQYVVLDEADEML
RMGFAEEVDKILEATPEEKQVVLFSATMPSSIRRISKQYLRNPQEISVKSNTSTGTNIRQ
RYVQVMGAHKLDAMTRILESEKSEGVIAFVRTKMATEDLADKLKSRGFTAAAINGDIPQQ
QRERTIENLRDGKIDILVATDVAARGLDVERVSHVINFDIPHDTESYVHRIGRTGRAGRS
GDAILFMTPREKYLLRAIEKATRQTVEHMHLPSVDAVNDKRLAKFADQIGETITSQDLTI
FRNLVEKFSAEHEDIDEVQIAAALAHMAQGGRPLLMQEMPAAPAKQARLAGGGKDGFGSR
GPSRALTEGNATYRIAVGRRQRVMPGSIVGALANEGGLTSAQIGGIDIRADHTLVELPAD
LSADQLRSLSRTRIGGELIHLELDNGRSPKSDREGGREGGGYRGGNGGGGYRGGNSGGGD
RGGYRGGNSGGGDRGGYRGSSDRREGGATEGGFDRDRGGNAGGGYRGNAGGGERSFGGSS
RKPRTTGGPRRRDY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaacccagaccaaatccgccgataccaagaccgaagagaaccagattctcttc
agcgatcttggacttgatggccgcgtcctcgccgccgtttccgatttgggctacgaaaag
ccctccccgattcaggcagccaccatcccgctgctgctcgaaggccgcgacgttgttggc
gttgcacagaccggtaccggcaagaccgccgcgttcgcccttcccgcactgtcgaagatg
gcagagctcgccgacctcaatggcaccgcacgcaagacccaggttctggttcttgctccg
acccgcgagctcgcgctccaggtcgccgaggccttcacctcctacgccaagcacatgggt
gacttcaccgtccttcccgtgtacggcggatccgcttacggcccgcagcttgccggcttg
cgccgcggcgctcaggttgttgtaggcaccccgggtcgcgtcatcgaccacatcaacaag
ggttccctggacctgtcggacctgcagtacgtggttctggatgaggccgacgaaatgctg
cgcatgggcttcgccgaagaggtcgacaagatcttggaagctaccccggaagagaagcag
gtcgtgctgttctcggccaccatgccgtcctcgatccgccgcatctccaagcagtacttg
cgcaacccgcaggaaatctcggtcaagtcgaacacctcgaccggtaccaacatccgccag
cgctacgtgcaggtcatgggagcccacaagctcgatgccatgactcgcatcctggaatcc
gaaaagtccgaaggcgttatcgccttcgttcgcaccaagatggcaaccgaggacctggcc
gacaagctcaagtcccgcggcttcaccgctgcagccatcaacggtgacatcccgcagcag
cagcgcgagcgcaccatcgagaaccttcgcgatggcaagatcgacatcctggttgccacc
gacgttgcagcccgtggcctcgacgttgagcgcgtgtcccacgtgatcaacttcgatatc
ccgcacgacaccgagtcctacgttcaccgcattggccgcaccggccgtgccggccgctcg
ggcgacgccatcctcttcatgaccccgcgcgaaaagtacttgctgcgtgcgatcgaaaag
gccacccgacagaccgtcgagcatatgcacctgccgagcgttgacgcagtgaacgacaag
cgccttgcgaagttcgccgaccagatcggtgagaccatcacctctcaggatctgacgatc
ttccgtaacttggtcgagaagttctccgctgagcacgaagacatcgacgaagttcagatt
gctgccgcactggcacacatggcacagggcggccgcccgctgctcatgcaggaaatgcca
gcggctccggccaagcaggcacgtcttgccggcggcggcaaagatggcttcggctctcgt
ggcccgtcccgcgccctgaccgaaggcaacgccacctaccgcatcgccgttggccgtcgc
cagcgcgtcatgcccggctccatcgttggcgcacttgccaacgaaggtggcctgacctcc
gctcagatcggtggcatcgacatccgtgccgatcacaccctagtggaactgccagcagat
ctctcggcagatcagctccgttcgctgtcccgcactcgcatcggtggcgagctgattcac
ctcgagctcgacaacggtcgcagcccgaagtctgaccgcgaaggtggccgcgaaggcgga
ggctaccgcggtggcaacggcggcggcggttaccgtggcggcaacagcggcggcggagac
cgtggcggttaccgtggcggcaacagcggcggcggagatcgtggcggttaccgtggctca
agcgatcgtcgtgaaggcggtgccaccgagggcggcttcgaccgcgaccgtggcggcaac
gccggtggcggctaccgcggcaacgcaggtggcggagagcgtagcttcggcggctcctca
cgcaagcctcgcacgactggtggcccgcgccgccgcgattactaa
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