Paeniglutamicibacter sp. Y32M11: KUF55_13180
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Entry
KUF55_13180 CDS
T07362
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
paey
Paeniglutamicibacter sp. Y32M11
Brite
KEGG Orthology (KO) [BR:
paey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paey03016
]
KUF55_13180
Enzymes [BR:
paey01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KUF55_13180
Transfer RNA biogenesis [BR:
paey03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KUF55_13180
Prokaryotic type
tRNA splicing ligases
KUF55_13180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QXQ09426
LinkDB
All DBs
Position
complement(2977233..2978399)
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AA seq
388 aa
AA seq
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METINSRLKNWASILDEKTREQAITTAKMPFIFPHLALMPDAHLGKGATVGSVIPTLGAI
IPAAVGVDIGCGMIAVKTQFTEEQLPKDRKSLREEIERAIPLSAGKYNRKVVATAEPRIA
ALKALAETAGFDPGDYAKNWELQLGTLGSGNHFIEVSLDEDNNVWLFLHSGSRGVGNRIA
TKHIKVAQQVAKKYWIDLPDPDLAYLVEGTEEFDSYIRELRWAQHFALLNREEMMDRVIR
QFTEWVGAEVQEIERINCHHNFTERETHFGKSVWLSRKGAIRAREGDPGLIPGSMGTASY
VVVGKGNPVALCSSPHGAGREYSRTAARKAFTIDQLRVAMTGIEYRDTDAFLDEIPGAYK
PIDQVMEDAADLVHVRHKLRQIINVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtggagaccatcaacagccggctcaagaattgggcgtccatcctggatgaaaagacccgt
gagcaggccatcaccaccgcgaagatgccgtttatcttcccccaccttgccctcatgccc
gatgcgcatctgggtaagggtgccaccgtcgggtcggtcatcccgacacttggtgccatt
atccccgccgccgtgggtgtcgacatcggttgcggcatgatcgcggtaaagactcagttc
accgaagagcagcttccgaaggaccgtaagagccttcgtgaggagatcgaacgagccatt
ccgctgtccgcgggtaagtacaaccgcaaggtcgtagccacggctgaaccgcgcattgcc
gcgctgaaggcgctggccgaaactgcgggatttgatccgggggactacgccaagaattgg
gaacttcagcttggcaccctgggctcggggaaccacttcatcgaggtgtcgctggatgag
gacaataacgtgtggctctttttgcactcgggctcgcgtggcgttggaaaccggattgct
accaagcacatcaaggtcgcccagcaggtcgccaagaagtactggatcgatttgcccgat
cccgaccttgcgtacctggtggaagggacggaggaattcgattcttatatccgcgaactg
cgctgggctcagcactttgccttgctgaaccgagaggaaatgatggatcgggtgattcgg
cagtttaccgaatgggtgggagcagaggtacaggaaattgaacgcatcaactgccaccac
aactttaccgagcgcgaaacgcactttggaaagtcggtatggctgtcccgtaagggcgcc
atccgtgcccgcgaaggggacccaggcctgattccgggctcaatgggcaccgcttcttac
gttgttgttggcaaggggaaccctgtggcactgtgctcgtcgccgcacggggcgggacga
gaatactcccgtacggccgcccgcaaggcgtttaccattgaccagctgcgtgttgctatg
acaggcatcgagtaccgggataccgacgccttccttgacgagattcccggagcttacaag
ccgattgaccaggtcatggaggatgctgccgatctcgtgcacgtgcggcataagctacgc
cagatcattaacgtcaagggcgattaa
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