Paracoccus aerodenitrificans: PAE61_03875
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Entry
PAE61_03875 CDS
T09265
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez03030
DNA replication
paez03430
Mismatch repair
paez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAE61_03875 (dnaE)
03430 Mismatch repair
PAE61_03875 (dnaE)
03440 Homologous recombination
PAE61_03875 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paez03032
]
PAE61_03875 (dnaE)
03400 DNA repair and recombination proteins [BR:
paez03400
]
PAE61_03875 (dnaE)
Enzymes [BR:
paez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAE61_03875 (dnaE)
DNA replication proteins [BR:
paez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAE61_03875 (dnaE)
DNA repair and recombination proteins [BR:
paez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAE61_03875 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WBU64593
LinkDB
All DBs
Position
519883..523347
Genome browser
AA seq
1154 aa
AA seq
DB search
MPESQPRFIHLRTHSEHSLLEGAVPVKKLVELTKAAGMPAVALTDTNAMFAGLEFSVKAM
DSGIQPIIGCQWTLLVGDVYGPVVALAQNRQGWLNLMALSSAMYLRQGGDPWHITEEDLT
SRSEGLILLTGGADGAVGRLLQAGHAAGVEALLRRLKDAFGDRLYVELTRHKDESGRIMA
TEAATEDSFIRLAYMLELPLVATNDVYFPKPEMYEAHDALICISERAYVDQSQPRRRLTP
NHDFKSPEEMALLFADLPEAVDNTVEIARRCAFAVSRHKPILPRFADDEVEELRRQAKQG
LEERLKVIPHAVSVEDYHKRLDFELGIIEQMGFPGYFLIVADFIKWAKDHDIPVGPGRGS
GAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQDKYGA
EKVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSVTKAIAEEPRLR
EIRDKEEVVARLLDYAAKVEGLYRNASTHAAGVVIGDRPLDQLVPLYRDPASEMPATQFN
MKWVEQAGLVKFDFLGLKTLTVIQNAVDLINGGGRPLHIAADGRKLYDPPEGAENQINAI
PLDDKASYELFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTY
CEVKNGQRDLEPLHPSIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKI
AEEMAKERPKFIKGSVENGVDEKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKA
NHPVEFMAGVMNCDIHLTEKLSVYKRELDRMEIEVVPPCVNRSGATFTVKEGRIHYALGA
LKGVGVEAMRAIETVRGDQPFADMVDFARRVDLRRVGKRALEMMARAGAFDLLDDNRARV
MASLDGLVAFSGASHDQAASNQSSLFGGGEDLPPPRPVLAQIWLPSERLGQEHQAIGFYL
SGHPIDDYLPALRRIEVNTLAEIRAAAAAGPLVTYIAGTVSSRQEKKSAKGNRFAFIGAS
DPTGLYEAVVFSDVLEASREHLEPGSNVVMQVQVEPQGDEVKMLARSVVPLEQAIANVGP
AELVLQIGESVDFPVLQDTLVGLDEDRGRRGKLILRIHEGDEVYDIEVTDRAPVGPSARQ
RYRVVPGVLDVVEQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaagtcagccgcgattcattcatctccgtacgcattccgagcactcgcttctg
gaaggggcggttccggtcaagaagcttgttgaactgacgaaggcagcgggaatgcccgca
gtggcgctgaccgatacgaacgccatgttcgccgggctggagttcagcgtgaaggcgatg
gattcggggatccagccgattatcggctgccagtggacgctgcttgtaggggatgtttat
ggacccgtcgtcgcgcttgcgcagaaccggcagggctggctgaacctgatggcgctgtcc
tcggcgatgtatctgcggcagggcggcgatccgtggcatatcaccgaggaggatctgacc
tcgcgttcagaagggctgatcctgctgaccggcggggctgacggtgcggtgggcagactg
cttcaggcgggccatgcggcgggggtagaggcgctgctgcgccgtctgaaagacgctttc
ggcgataggctttatgtcgagctgacccgccacaaggacgaatccggccggatcatggcg
accgaggcggcgaccgaggacagtttcatccggctggcctatatgctggaactgcctctg
gtggcgacgaatgatgtctatttccccaaacccgagatgtatgaggcgcatgacgcgctg
atctgcatttcggaacgtgcctatgtggatcagtcccagccccgccgccgcctgaccccg
aaccatgatttcaaatcgcccgaggaaatggcgcttctgttcgccgatcttcccgaggcc
gtcgacaacaccgtcgaaatcgcccgccgctgcgcttttgccgtcagccgccataagccg
atcctgcctcgcttcgccgatgacgaggttgaggaattgcgccgtcaggccaagcagggg
cttgaagagcggctgaaggtcatcccccacgccgtcagcgtcgaggattaccacaagcgg
ctggatttcgaacttggcattatcgagcagatgggtttccccggctatttcctgatcgtt
gccgatttcatcaaatgggccaaggatcacgatattccggtcggaccgggcagggggtcc
ggcgcggggtctttggtggcctatgctctgacgatcaccgatctggacccgctgcgctat
tccctgctgttcgagcggttcctgaacccggaacgggtcagcatgcccgacttcgacatc
gatttctgcatggatcgccgggaagaggtgatccgctatgtgcaggataaatacggcgct
gaaaaagtcggccagatcattactttcggtgcgctgctgtccaaggccgctgtgcgcgat
gtgggccgggtgctgcaactgcccttcggtcaggtggaccggctgtcgaagatgatcccg
gtcgaaggcgtgaagccggtcagcgtcaccaaggccatcgccgaggaaccccgcctgcgc
gagatccgcgacaaggaagaggtcgtcgcgcggcttctggactatgccgccaaggtggaa
gggctgtaccgcaacgcctcgacccatgctgcgggggtggtgatcggcgaccgtcctctg
gatcagcttgtgccgctgtatcgtgatccggcctcggaaatgcccgcgacgcaattcaat
atgaaatgggtcgaacaggccgggttggtgaagttcgactttctgggtctgaaaaccctg
acggtcatccagaacgcggtggatctgatcaatggcggcgggcggcccctgcatatcgcc
gccgatggacgcaagctttacgacccgcccgagggcgcggaaaaccagatcaacgccatc
ccgctggatgacaaggccagctatgagctgttcgcttcagcgcgcaccgtggccgtgttc
caggtggaaagctcgggcatgatggacgcgctgcggcgcatgaagccgacctgtatcgag
gatatcgtggcacttgtggcgctgtatcgtcccggcccgatggagaacatcccgacctat
tgcgaggtcaagaacgggcagcgcgatctggaaccgctgcatccatccatcgaccatatc
cttgaggaaacgcagggcatcatcgtctatcaggaacaggtgatgcagatcgcgcaggtc
atggcgggttacagccttggcggcgccgacctgctgcgccgcgcgatgggcaagaaaatc
gccgaggaaatggcgaaggaacgcccgaaattcatcaagggcagcgttgaaaatggcgtg
gatgagaagaaggcaggcgaagtctttgacctgctggaaaaattcgcgaattacggcttc
aacaaatcccacgcggcggcttatgccgtcgtgtcctatcagaccgcatggctgaaggcg
aaccacccggtcgagttcatggcaggcgtcatgaattgcgatatccacctgaccgagaag
ctgagcgtctataaacgcgaactcgaccgcatggaaatcgaggtcgtgccgccctgcgtc
aaccgctcgggcgcgaccttcacggtcaaggaggggcgcatccattacgcgctcggtgcg
ctgaaaggcgtcggggttgaggcgatgcgggccattgagaccgtgcgcggcgatcagccc
ttcgccgatatggtcgatttcgcccgccgcgtcgatctgcgccgcgtcggcaagcgggcg
cttgagatgatggcgcgggcaggggcgtttgatctgctggacgataatcgcgctcgggtc
atggcctcgcttgacgggctggtggcgttttccggggccagccacgatcaggcggcgtcg
aaccagtcatccctgtttggcgggggcgaggatctgccgccgccgcgcccggttctggcg
cagatctggctgccatccgaaaggctggggcaggagcatcaggcgatcgggttctatctg
tcgggccatcccatcgacgattatctgcccgcgctgcgccggatcgaggtcaacacactt
gccgaaatccgcgcagccgccgcggcggggccgctggtgacctatatcgcgggcacggtg
tcctcacggcaggaaaagaaatccgccaagggcaatcgttttgcctttatcggggcgtct
gatccgaccgggctatatgaggccgtggtgttctccgacgtgctggaagccagccgggaa
catctggaacccggcagcaatgtcgtcatgcaggtgcaggtcgagccgcagggcgatgag
gtcaagatgctggcgcgttccgtcgtcccgctggaacaggcgattgccaatgtcggcccg
gcagagcttgtgcttcagatcggcgaaagcgtcgattttccggtgttgcaggatactctg
gtcggtctggatgaggatcgcggcaggcgcggaaagctgatcctgcgcatccatgagggc
gatgaggtctatgatatcgaggttacggaccgcgcccctgtcggccccagcgcacggcag
cgatatcgcgtggtgccgggcgttctggacgtggtagagcaatag
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