Paracoccus aerodenitrificans: PAE61_04110
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Entry
PAE61_04110 CDS
T09265
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAE61_04110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paez03019
]
PAE61_04110
03009 Ribosome biogenesis [BR:
paez03009
]
PAE61_04110
Enzymes [BR:
paez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PAE61_04110
Messenger RNA biogenesis [BR:
paez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAE61_04110
Ribosome biogenesis [BR:
paez03009
]
Prokaryotic type
rRNA processing factors
PAE61_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WBU64636
LinkDB
All DBs
Position
566210..568891
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AA seq
893 aa
AA seq
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MAKKMLIDATHAEETRVVVVDGTKVEEFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPAADRQALLEEEKAYAEAVAAEDAAEKGKPVRRRRSKAE
KAASDDAKVTSDAIPGMELVDNEAEENDSSSADEGVAVDETQDIVADAAEDSAADASDKD
DSIESVADEDVTEEIRIPKKPRPRRYKIQEVIKVRQIMLVQVVKEERGNKGAALTTYLSL
AGRYCVLMPNTARGGGISRKITSASDRKKLKDIASDLKVPQGAGLIIRTAGSQRTRTEIK
RDYEYLMRLWEQIRELTFNSTAPSPIYEEGDLIKRTIRDLYSREIDEVLVEGERGYRVAK
DFMKMIMPSHARNVKHYHDPMPLFARYQVEGYLGGMFNPVVQLKSGGYIVIGVTEALVAI
DVNSGRATKEGSIEDTATKTNLEAADEISRQLRLRDLAGLIVIDFIDMDERKNNLAVEKR
LKDRLKTDRARIQVGKISGFGLLEMSRQRLRPGMLESTTQPCAHCHGTGLIRSDDSLALT
ILRAIEEEGTRKRSREVLVKAPVAVANFLMNGKREHIALIEARYGMAVRVEADPQLISPD
FAIEKFKSATRALPDSVHAVLSVDASLMAQIDEDDQEEEIPAEEEAESDNRAETSDADSE
GNGRSKRRRRRRRRGGKDRSDENGHISENGDDAQDSADGRSEGDDQSREDGSDREDAVEG
EKPEAAETAKPKSRSRSRSRRRPQAEASEDQQPETDQGEVAPAVPVAAANVVDLRDLPVR
SDGAEPVQQALEDAAEATPETAEIPSEVAEDVPADAPVAEKLSAVNDPVAPVAPAPAVEE
APAEAIQNGMPEASDSAAAEEPAADAEPVETEPTVEEEAAPPRPKRRGWWSIG
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatgctgatcgacgcaacgcacgcggaagaaacccgcgtcgttgtggtg
gacggaaccaaggtcgaggagtttgacttcgagacagtcaacaagcggcagcttgctggc
aatatctatctggcaaaggtaacgcgggtcgaaccgtcgcttcaggcggcattcgtcgat
tacggcggaaaccggcacggatttctggccttcgccgaaatccacccggattattaccag
atccccgccgctgaccggcaggctcttttggaagaagaaaaggcctatgccgaggcggtt
gccgctgaggatgcggcggaaaagggcaagcccgtacgtcgccgccgctccaaagccgag
aaggcagcaagcgacgatgccaaggtcacgtcggacgctattccgggaatggaactggtt
gataacgaagccgaggagaacgattcttcctctgccgatgagggcgttgcggtcgatgag
acgcaggatatcgtcgctgacgcggctgaagacagcgcggcagatgcgtcggacaaggat
gacagcattgaatcggtcgccgatgaggatgtgaccgaggaaatccggattccgaagaag
ccgcgtccccgccgctacaagattcaggaggtgatcaaggtccgccagatcatgctggtg
caggtggtcaaggaagagcgcggcaataagggtgccgcactgacgacatatctgtctctg
gccggtcggtattgcgttctgatgccgaataccgcgcgtgggggtgggatttcgcgcaag
atcaccagtgcatccgaccgcaagaagctgaaagacattgcctcggatctgaaagttcct
cagggcgcggggctgatcatccgcaccgcaggcagccagcggacccggaccgagatcaag
cgcgattacgaatatctgatgcgtctgtgggagcagatccgcgaactgacattcaactcg
accgcgccgtcgccgatctatgaggaaggcgatctaatcaagcggaccatccgcgacttg
tacagccgcgagattgacgaggtgcttgtcgagggtgagcgcggctatcgcgtggccaag
gacttcatgaagatgatcatgccgtcccatgcccgcaacgtgaaacattatcacgatccg
atgccgcttttcgcccgctatcaggtcgagggctatctgggcgggatgttcaacccggtc
gtgcagttgaaatccgggggctatatcgtcatcggcgtgaccgaggctcttgtggcgatc
gacgtcaactctggtcgggcgacgaaggaaggctcgatcgaggataccgcgacgaagacc
aatctcgaagctgccgatgagatttcccggcagttgcggctgcgcgaccttgccggtctg
atcgtcatcgacttcatcgacatggacgagcgcaagaataacctcgccgtcgaaaagcgg
ctgaaggaccggctgaagacggatcgggcgcggattcaggtcggcaagatttccggcttt
ggcctgctggagatgagccgtcagcgccttcgtcccggcatgctggaatcgaccacgcag
ccttgtgcgcattgtcacggaaccgggctgatccgctcggatgacagtctggcgctgacc
attctgcgtgccatcgaggaagaaggcacccggaaacgctcgcgtgaggttctggtcaag
gcacctgtcgcggtggcgaatttcctgatgaacggcaagcgcgagcatatcgcgctgatt
gaggcccgctatggcatggcggtgcgggtcgaggccgatccgcagcttatctcgccggat
ttcgcgattgagaaattcaaaagcgcgacccgtgcgctgccggattccgtccatgccgtc
ctgtcggtggatgcaagcctgatggctcagatcgatgaggatgaccaagaggaagaaatc
ccggcggaggaagaggccgaaagcgataaccgcgccgagacctccgatgcggattcagag
ggcaatggccgctccaagcgccgccgccgccgtcgccgtcgcggcggaaaggatcgttcc
gatgagaacggccatatctccgagaatggcgacgatgcgcaggacagcgccgatggtcgc
agtgaaggggacgatcagtctcgggaagacggttcggatcgcgaggatgcagtggagggt
gaaaagccagaagctgctgaaacagccaagccgaaatcgcgcagccgctcccggtcgcgt
cgccgtcctcaagccgaggcctccgaggatcagcagccggaaacggatcagggcgaggtt
gctccggcagtgcctgtggccgccgcgaatgtcgtcgatctgagagatctgcccgtcaga
tcggatggggcagaacccgttcagcaggcgctagaggatgcggctgaagcgacaccggaa
accgctgaaattccttctgaggttgccgaagatgttccggcagatgctccggtggctgaa
aaactgtctgcggttaatgatcctgttgcgccggtggctccggcacctgcggttgaggaa
gctccggctgaagcaattcagaacgggatgccagaagcctcagacagcgccgcagccgaa
gaaccggcagcagatgcagaacctgtcgagaccgaacccaccgtggaagaagaggccgcg
cctccgcgtcccaaacgccggggatggtggtccatcggatga
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