Paracoccus aerodenitrificans: PAE61_05880
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Entry
PAE61_05880 CDS
T09265
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAE61_05880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paez03021
]
PAE61_05880
03400 DNA repair and recombination proteins [BR:
paez03400
]
PAE61_05880
Enzymes [BR:
paez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAE61_05880
Transcription machinery [BR:
paez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAE61_05880
DNA repair and recombination proteins [BR:
paez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAE61_05880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WBU64958
LinkDB
All DBs
Position
898802..899818
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDIKTGADATRTATVTAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVTLKMDVDGTKRLTLTAKGPGEVKAGDIQE
TAGITVLNRDHVICHLDDGADLSMELTVASGKGYVAADKNRPEDAPIGLIPIDAIFSPVK
RVSYEVTPTREGQVLDYDKLTMKVETDGSLTPEDAVAYAARILQDQLSVFVNFDEPEAAR
AQDSDDGLEFDPRLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVVDWPPENIEDLAKRFDDHF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataaaaactgggccgagctgatcaagccgacgcagcttgatatcaagaccggc
gctgacgcgacccgcaccgcgaccgtcactgccgaaccgctggagcgtggcttcggcctg
acgctcggcaacgcgctgcgccgtgtgctgctgtcctcgcttcagggcgcggccatcacc
agcgtgcagatcgacaatgtgctgcatgaattttcgtccgtcgccggtgtgcgcgaggac
gtgaccgatatcgtcctgaacctcaagggcgtgacgctgaaaatggatgtcgatggcacc
aagcgcctgaccctgaccgccaaaggtccgggcgaggtgaaggccggcgatattcaggaa
accgccggaatcaccgtactgaaccgcgatcatgtcatctgccatctggatgacggcgcc
gatctgagcatggaactgaccgtcgccagcggcaagggctatgtcgccgccgacaagaac
cgtcccgaggacgcgcccatcgggctgatcccgatcgacgcgatcttctcgccggtcaag
cgtgtcagctatgaagtcaccccgacccgcgaaggtcaggtgctggattatgacaagctg
acgatgaaggtcgaaaccgacggttcgctgaccccggaagatgccgtggcttatgcggcg
cgtatccttcaggaccagctttccgtgttcgtcaacttcgatgagccggaagccgcccgt
gcgcaggacagcgatgacggtctggaattcgatccgcgtctgctgaagaaggtcgatgaa
ctggaactgtcggtccggtcggccaactgcctgaagaacgacaatatcgtctatatcggt
gatctaatccagaaaaccgaagccgagatgctgcgcaccccgaatttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtcgggcatgggcctgcatctgggcatggatgtggtc
gactggccgccggagaatatcgaagatctggccaagcgtttcgacgaccatttctga
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integrated database retrieval system
