Paracoccus aerodenitrificans: PAE61_12330
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Entry
PAE61_12330 CDS
T09265
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez00470
D-Amino acid metabolism
paez00550
Peptidoglycan biosynthesis
paez01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAE61_12330 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PAE61_12330 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paez01011
]
PAE61_12330 (murD)
Enzymes [BR:
paez01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PAE61_12330 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paez01011
]
Precursor biosynthesis
Amino acid ligase
PAE61_12330 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
TrkA_N
KARI_N
AdoHcyase_NAD
MurD-like_N
ApbA
F420_oxidored
NAD_binding_2
NAD_Gly3P_dh_N
DUF7519
Motif
Other DBs
NCBI-ProteinID:
WBU63143
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Position
complement(2229632..2231026)
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AA seq
464 aa
AA seq
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MIPVQGVSGQIIAVLGLGRSGKATAAALQAGGAHVVVWDDGQEARAQAETEGLEIRDLNR
AEAWEGITALITSPGIPHLYPDPNPVIARALELGIPVDNDIGLFFRSFATPDWDDFATMP
KVITVTGSNGKSTTTALIHHILQSIGRPVQMGGNIGTGVLSLEPAHDGEVVVIELSSYQT
DLARALTPDVAVFTNLSPDHLDRHGGPGGYFAAKRRLFAEGGPDRCVIGVDEIEGRYLAN
QMGQGPGDDRVIRISSGQKLDSFAWGVFARKGFLSENRKGRQVASIDLRMVTGLPGTHNH
QNACAAYAACRAVGLAPRDIEAAFHSFAGLPHRSQTVRELNGVRYVNDSKATNIDAAEQA
LQAFRNIRWIAGGLGKDGGIAALQPHLGNVVKAYLIGHSARDFALQLGDTPHEVSDTMEA
AIARAHAEAQPGETVLLAPAAASFDQYPNFEKRGEHFTALVNAL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtccaaggcgtctccggccagataatcgccgtcctcggcctcggccgttcg
ggcaaagccactgccgcagcgttacaggcgggtggggcgcatgtcgtggtctgggatgat
gggcaagaggcccgtgcgcaggcagagaccgaggggctggagatccgcgatctcaaccgc
gccgaggcatgggaggggatcacggcgctgatcacctcgcccggcattccgcatctttac
cccgacccgaacccggttattgcgagggcgcttgaactgggaatccctgtcgataacgat
atcgggctgttcttccgcagctttgcgacgccggactgggatgatttcgcaaccatgccg
aaggttattacggtgaccggctcgaacgggaaatccaccaccacggcgctgattcaccac
attctgcaaagcattggccgtccggttcagatgggtggcaatatcggcaccggagtcctg
tcgcttgaacccgcccatgacggcgaggtggtggtgatcgagttgtcatcctatcagacc
gatcttgcccgggcgttgacgccggatgtggcagtcttcactaatctgtcgccggatcat
ctggaccgtcacggcgggccgggcggctattttgccgccaagcgacggttatttgcggaa
ggcggcccggatcgctgcgtgatcggggtggatgagatcgaggggcgctatctcgccaat
cagatggggcaggggcccggcgatgaccgggtgatccggatttcttcgggccagaagctc
gacagcttcgcctggggtgttttcgcgcgaaaaggatttctcagcgaaaatcgcaagggc
cgtcaggtcgcctcgatcgatctgcggatggtgaccggcctgcccgggacgcataatcat
cagaatgcctgcgccgcctatgctgcctgccgggccgtggggcttgctcctcgtgatatc
gaggcagcgtttcacagctttgccgggcttccgcatcgcagccagaccgtgcgcgagctg
aatggcgtgcgctatgtgaacgactcgaaagcgacgaatatcgacgccgccgagcaggct
ttgcaggcgttccgtaatatccgctggatcgcgggcgggcttgggaaggatggcggcatt
gctgccttgcagccccatctggggaatgtggtgaaagcctatctgatcggccactccgcc
agggatttcgcgcttcagcttggagatacgccgcatgaggtctcggacacgatggaggct
gccatcgcccgcgcccatgcggaagcgcagcccggtgagacggtgttgctggcccccgct
gcggcaagcttcgatcaatatcctaatttcgagaaacgcggcgagcatttcaccgcattg
gtgaacgcgctctga
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