Paracoccus aerodenitrificans: PAE61_12485
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Entry
PAE61_12485 CDS
T09265
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
paez
Paracoccus aerodenitrificans
Pathway
paez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAE61_12485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paez03019
]
PAE61_12485
Messenger RNA biogenesis [BR:
paez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PAE61_12485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
WBU63173
LinkDB
All DBs
Position
complement(2262319..2263992)
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AA seq
557 aa
AA seq
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MSDRLIYLPLGGAGEIGMNAYVYGYGPKGKERLILVDLGVTFGDMDSTPGIDLIMADIAW
LQANKNRIEAIFITHAHEDHVGALGLLWDRLELPVHCRLFTGTLARMKMEERGLPTDAVK
IHEPRPEVITAGPFKVQFMPISHSIPESSALLIDTPAGRIVHTGDFKLDGTPGVGEAFDP
VLWHEIAGEGDGVKVLTCDSTNVFSPNPGRSEALLSNPLLDFVMVQPNMVVATTFASNVA
RVKTLAEAGVAAGRKICLLGRSMRRMVQVAEETGVLTGFPNTISPEDAADLPRDKVMLIV
TGSQGERRAATAQLARGSYLGIRLKEGDSFLFSSRIIPGNERGVIRNMNQFSEIGVDVYD
ADDGIYHVSGHANRPDLEAVHDLLKPQILIPMHGEHMHLREHAGIGRGKGIASIVATNGT
VVDITGDTPQIVDEVENGRIYLDGNVLIGAMDGVVRDRIRMALNGHAMVSVIIDENDNPF
PDAWVEPMGLPERGRSNQPVAQMIEGELSEFLESADAKTVADDQKLEEAVRKITRQVTME
EIGKKPEVTVIISRLAP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccggctaatctatctgccgcttggcggcgcgggcgaaatcggcatgaacgcc
tatgtctatggctacggccccaagggaaaagagcgtctgatccttgtcgatctgggcgtc
accttcggcgatatggattcgacccccggcattgacctgatcatggccgatatcgcctgg
cttcaggccaataagaaccggatcgaggcgattttcatcacccatgcgcatgaggatcat
gtcggcgcgttgggcctgctgtgggaccggcttgaactgccggttcactgccgcctgttc
accggcacgctggcccgcatgaagatggaagagcgtggcttgccgaccgatgcggtcaag
atacatgagccgcgccccgaggtgatcaccgccggaccgttcaaggttcagttcatgccg
atcagccactcgatccccgaaagctcggctctgttgatcgacacgcctgccgggcggatc
gtgcatacgggcgatttcaagctggatggcacgccgggcgtcggtgaggccttcgatccg
gtgctctggcacgaaatcgccggagagggcgatggcgtcaaggttctgacctgcgattcg
accaatgtgttcagccccaatcccggccggtccgaggcattgctgtcgaatccgctgctg
gatttcgtcatggtgcagcccaatatggtcgtggccacgacatttgcctccaatgtggcc
cgggtgaagacactggccgaggcaggcgtggccgccgggcgcaagatctgccttctgggc
cgctcgatgcggcgcatggtgcaggtggccgaggaaaccggcgtattgaccggttttccc
aacacgatcagccccgaggacgccgccgatctgccgcgcgataaggtcatgctgatcgtg
accggcagccagggtgagcggcgggcggcgacggctcagcttgcgcggggctcttatctg
gggatccggctgaaagagggcgacagcttcctgttcagttctcggatcatccccggcaat
gagcgcggtgtgatccgcaatatgaaccagttctcggaaattggggttgatgtctatgac
gcggatgacgggatctatcacgtctcgggccacgcgaaccgccccgatcttgaggcggtg
catgatcttctgaagccgcagatcctgattccgatgcatggtgagcatatgcatctgcgc
gaacatgccgggatcggacgcggcaaggggattgcctcgatcgtggcgaccaacggaacg
gttgtcgatattaccggcgatacgcctcagatcgtggatgaggttgaaaacggacggatc
tatctggacggcaatgtgctgatcggcgcgatggacggcgttgtccgtgaccgcattcgc
atggcgctgaacggtcatgcgatggtcagcgtcattatcgacgaaaacgacaatccgttc
cccgatgcctgggtcgaaccgatgggtctgccagagcggggacgctcgaatcagcccgtc
gctcagatgatcgagggcgagttgtccgaatttctggaatcggcagatgcaaagacagtt
gccgacgatcagaagctggaggaagctgtccgcaagattacccgccaggtgacgatggaa
gagatcggcaagaagcccgaggtcacggtcattatcagccgtctcgcgccctga
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