Paracoccus aerodenitrificans: PAE61_12735
Help
Entry
PAE61_12735 CDS
T09265
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paez
Paracoccus aerodenitrificans
Brite
KEGG Orthology (KO) [BR:
paez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paez03032
]
PAE61_12735 (topA)
03400 DNA repair and recombination proteins [BR:
paez03400
]
PAE61_12735 (topA)
Enzymes [BR:
paez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PAE61_12735 (topA)
DNA replication proteins [BR:
paez03032
]
Prokaryotic type
DNA Topoisomerases
PAE61_12735 (topA)
DNA repair and recombination proteins [BR:
paez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAE61_12735 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WBU63221
LinkDB
All DBs
Position
2309245..2311902
Genome browser
AA seq
885 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDPEADFDMKWEVASDSKK
HLKAIRDALSGDDALILATDPDREGEAISWHLLEALAPALKKGKSVSRVTFNAITKNAVT
DAMAKPREIDRDLVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVERE
MEIEAFKPREYWSVHARLATPLGEEYDATLVSLAGDKLERFDIPTAEKARLALSAINARD
LTVSSVTAKPATRNPWPPFMTSTLQQEASRKLGLGARACMSTAQRLYEAGLITYMRTDGI
DMAPEAVMSARDVIKSRFGENYLPKSPRMYKNKAKNAQEAHECIRPTDMSVSPDRLRISE
KDQRALYDLIWKRTLASQMEAARMERTTVEIASADGQVGLRATGQVMMFDGFLAVYDQGR
DDDDSEDSNRLPQISEGEAARKIAAFAAEEGVLVDDSKTAAARQHFTQPPPRYTEATLVK
KMEELGIGRPSTYASIVTTIQDREYVRKDKNRLIPEDKGRLVTAFLVKYFPRYVSYDFTA
NMETELDDISSGNRAYREVLRRFWRDFTAALEGTTDLRIGEVLEAIDEALAPHLYPARED
GGDPRECPLCGQGRLNLKTARSGGAFIGCSRYPECRYTRPLSAPDGEEAIGDRVLGDDAG
DEISLKNGRFGPYVQRGEPTEDQPKPPRASIPKGWDANSVDLEQALKLLALPRPIGPHPE
DGELVEAGIGRYGPYVKHGKKYANLPDVEEVFTVGMNRAVEVLASKPTRGRAAAAAPLKE
LGDHPDGGKIAVMSGRYGPYVKWEKINATLPRDLEPADITMEQALELIAAKAAKSPKKKT
AAKKTAASKTAKKPAAKKAGSKATAKKSPAKTARKPAATKKEAEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgtcgttgtcgaatcgccggccaaagccaagacgatcaacaaatatctgggc
gacgattataccgttctcgcctcgttcgggcatgtccgcgacctgccgccgaaagacggc
tcggtcgatcccgaggccgatttcgacatgaaatgggaggtggcctcggattcgaagaag
cacctcaaggcgatccgcgatgcgctgtcgggcgatgacgcgctgatcctcgccaccgac
cccgaccgtgagggcgaggcgatttcctggcatttgctggaggctctggccccggcgctg
aaaaaaggcaaatcggtcagccgcgtgaccttcaacgcgattacgaagaacgccgtgacc
gacgcaatggccaagccgcgcgagatcgaccgcgatctggtcgatgcctatctggcccgc
cgtgcgctggattatcttgttggtttcaacctttcccctgtgctgtggcgcaaactgccc
ggcgcgaaatcggcgggccgcgttcaatcggtcacgctgcgcctgatcgtcgaacgcgag
atggagatcgaggcgtttaaaccgcgcgaatactggtccgtccatgcccgtctggcgaca
cccttgggtgaggaatatgatgcgactctggtcagccttgccggtgacaagcttgaacgt
ttcgacattccgaccgccgaaaaggcacggctggcgctttccgccatcaacgcgcgggac
ctgaccgtcagcagcgtcaccgccaagcccgccacgcgcaatccgtggccgcctttcatg
acctcgaccctccagcaggaagcgtcgcgcaagcttggtcttggcgcacgggcctgtatg
tccacggcgcagcggctttatgaggcggggctgatcacctatatgcggaccgatggcatc
gacatggcgcccgaagccgtgatgtccgcccgcgatgtcatcaaatcgcgtttcggtgaa
aactacctgccgaaatcgccgcgcatgtacaagaacaaggccaagaacgcgcaggaagcg
catgaatgtatccgccccacggatatgtcggtttctcccgacagattgcggatttccgaa
aaggatcagcgggcgctctatgatctgatctggaagcggacgctggccagccagatggaa
gccgcccgcatggagcgtaccacggtcgaaatcgccagcgcggacgggcaggtcgggcta
cgggccacaggtcaggtgatgatgttcgacgggttcctggccgtttacgatcagggccgc
gacgacgacgattccgaggacagcaaccgcctaccccagatcagtgagggcgaggccgcc
cgcaagattgccgccttcgccgccgaagagggcgtgctggtcgatgacagcaagaccgcc
gccgcgcgtcagcatttcacgcagcccccgccgcgctataccgaggcaacgctggtcaag
aagatggaggaactcggcatcggccggccttcgacctatgccagcatcgtcacgaccatt
caggaccgcgaatatgtccgcaaggacaagaaccgcctgatccccgaggataaggggcgg
ctggtgacggcatttctggtgaaatatttcccgcgctatgtctcttatgattttaccgcg
aatatggaaacagagctggacgatatcagctcgggcaaccgcgcctatcgtgaggtgctg
cgccgcttctggcgggatttcacggcggcgcttgaaggcaccaccgatctgcgcatcggt
gaggtgctggaagccattgacgaagcgcttgctccgcatctctatccggcgcgggaggat
ggcggcgatccgcgcgaatgcccgctttgcggtcagggacggctgaacctgaagacagct
cggtccggcggggcctttatcggatgctctcgttatcctgaatgccgctatacaaggccc
ctgtctgcgccggatggtgaggaagccattggcgatcgggttctgggtgatgatgcgggc
gatgagatcagcctgaaaaacggtcgcttcggcccctatgtccagcgaggggagccgacc
gaggatcagcccaaaccgccgcgcgcatcgatcccgaaaggctgggacgcgaacagcgtc
gatctggaacaggcgctaaaattgctggccctgccccgccccatcggtccgcaccccgag
gatggcgaactggtcgaggccggaatcgggcgctatgggccttacgtcaagcacggcaag
aaatacgccaatctgcccgatgtcgaagaggtcttcaccgtcggcatgaatcgcgcagtc
gaggttctggcctcgaaacccacgcgcgggcgggccgcggcagccgctcctctgaaagag
cttggggaccatcccgatggcggaaagattgccgtgatgagcgggcgctatgggccgtat
gtgaaatgggaaaagatcaacgcgaccctgccgcgcgatctggagcctgccgatatcacg
atggaacaggcgctggagctgatcgcagccaaggccgccaaatcgccgaaaaagaaaact
gcggcgaaaaaaaccgctgccagcaagacggcaaaaaagcctgctgcgaagaaagccgga
agcaaggcgacggcgaagaaatctccggcgaaaaccgccaggaaacccgctgcgacaaag
aaagaggctgaagaataa
DBGET
integrated database retrieval system
