Pseudomonas aeruginosa M18: PAM18_0087
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Entry
PAM18_0087 CDS
T01973
Symbol
hcp1
Name
(GenBank) Hcp1
KO
K11903
type VI secretion system secreted protein Hcp
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf02025
Biofilm formation - Pseudomonas aeruginosa
paf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PAM18_0087 (hcp1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PAM18_0087 (hcp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paf02044
]
PAM18_0087 (hcp1)
Secretion system [BR:
paf02044
]
Type VI secretion system
Imp/Vas secretion system core components
PAM18_0087 (hcp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
AEO72576
LinkDB
All DBs
Position
101811..102287
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AA seq
158 aa
AA seq
DB search
MFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDK
STPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTEN
VTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaagatcggcgacgtcaagggtgagtccaaggacaagactcacgccgaggaa
atcgacgtgctggcatggagctggggcatgtcccagtccgggtcgatgcacatgggcggt
ggcggcggcgccggcaaggtcaacgtgcaggacctgtcgttcaccaagtacatcgacaag
tccacgcccaacctgatgatggcctgctccagcggcaagcactatccgcaggcgaagctg
accatccgcaaggccggcggcgagaaccaggtcgagtacctgatcatcaccctgaaggaa
gtcctggtgtcctcggtgagcaccggcggcagcggtggcgaggatcgcctgaccgagaac
gtgaccctgaacttcgcccaggtccaggtcgactaccagccgcagaaggcggatggcgcg
aaggacggcggtccggtcaagtacggctggaacatccgccagaacgtgcaggcctga
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