Pseudomonas aeruginosa M18: PAM18_1488
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Entry
PAM18_1488 CDS
T01973
Symbol
rhlR
Name
(GenBank) transcriptional regulator RhlR
KO
K18099
LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf02024
Quorum sensing
paf02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAM18_1488 (rhlR)
02025 Biofilm formation - Pseudomonas aeruginosa
PAM18_1488 (rhlR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paf03000
]
PAM18_1488 (rhlR)
Transcription factors [BR:
paf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PAM18_1488 (rhlR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_20
HTH_23
HTH_28
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AEO73975
LinkDB
All DBs
Position
1638059..1638763
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AA seq
234 aa
AA seq
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MLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHGTYPKA
WLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGATLPIRAP
NNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLSHRERE
ILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtggtgggacggtttgcgtagcgagatgcagccgatccacgacagccagggcgtg
ttcgccgtcctggaaaaggaagtgcggcgcctgggcttcgattactacgcctatggcgtg
cgccacacgattcccttcacccggccgaagaccgaggtccatggcacctatcccaaggcc
tggctggagcgataccagatgcagaactacggggccgtggatccggcgatcctcaacggc
ctgcgctcctcggaaatggtggtctggagtgacagcctgttcgaccagagccggatgctc
tggaacgaggctcgcgattggggcctctgtgtcggcgcgaccctgccgatccgcgcgccg
aacaatttgctcagcgtgctttccgtggcgcgcgaccagcagaacatctccagcttcgag
cgcgaggaaatccgcctgcggctgcgttgcatgatcgagttgctgacccagaagctgacc
gacctggagcatccgatgctgatgtccaacccggtctgcctgagccatcgcgaacgcgag
atcctgcaatggaccgccgacggcaagagctccggggaaatcgccatcatcctgagcatc
tccgagagcacggtgaacttccaccacaagaacatccagaagaagttcgacgcgccgaac
aagacgctggctgccgcctacgccgcggcgctgggcctcatctga
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