KEGG   Pseudomonas aeruginosa M18: PAM18_1825
Entry
PAM18_1825        CDS       T01973                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
paf  Pseudomonas aeruginosa M18
Pathway
paf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAM18_1825 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paf03400]
    PAM18_1825 (uvrB)
DNA repair and recombination proteins [BR:paf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PAM18_1825 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PAM18_1825 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22
Other DBs
NCBI-ProteinID: AEO74311
LinkDB
Position
1997731..1999743
AA seq 670 aa
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKTFFPHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHLDRGDRIDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEPPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETL
VEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPE
IEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNVTGSMQRAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVV
PGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDEI
QTLRERLVNV
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggatacgttccaactcgactcgcgcttcaagcccgccggcgaccagccggaagccatc
cggcagatggtcgaggggctggaggcggggctttcgcaccagaccctgctgggggtgacg
ggctctggcaagactttcagcatcgccaacgtgattgcccaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcccagctctacggggagttcaagacgttcttc
ccgcacaattccgtggagtacttcgtttcctactacgactactaccagccggaggcctac
gtcccgtcttccgatacctatatcgagaaggactcctcgatcaacgaccatatcgagcag
atgcgcctgtcggcgaccaaggcgctgctcgagcgtccggatgcgatcatcgtcgccacc
gtgtcgtccatctacggcctcggtgatcccgcgtcctacctgaagatggtcctgcacctg
gaccgcggcgaccgcatcgaccagcgcgaactgctgcggcgactgaccagcctgcagtac
acccgcaacgacatggatttcgcccgtgcgactttccgtgtgcgtggcgatgtgatcgac
atcttcccggccgaatccgatctcgaggcgattcgtgtcgagttgttcgacgacgaggtg
gaaagcctctcggccttcgatccgctcaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtgaccccgcgcgagacgctgctggaggcggtcgac
cagatcaaggccgaactcaaggaacgcctagactacctgcgcaacaacaacaagctggtg
gaagcgcagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgagttgggc
tactgcaacggcatcgagaactactcgcgctatctttccgggcgggcccccggcgagccg
ccgccgacgctctacgactacctgccggccaactcgctgctggttatcgacgaatcgcac
gtcagcgttccgcaggtcggtgcgatgttcaagggcgaccgctcgcgcaaggagaccctg
gtggaatacggtttccgcctgccttcggcgctggacaaccggccgctgcgcttcgaagag
tgggaggcggtgagtccgcagaccatcttcgtctccgccaccccgggcccctacgaggcg
gagcatgccgggcgggtcatcgagcaggtggtgcgtcccaccgggctggtcgatccggag
atcgaggtacgtccggcgatgacccaggtggatgacctgctctcgcagatccgccagcgt
gtggccaaggacgagcgggtgctggtgactaccctgaccaagcgcatggccgaggacctc
accgattatctcggcgatcacgacgtgcgggtgcgctacttgcactcggacatcgatacc
gtcgagcgagtggagatcatccgcgacctgcgcgccggtgcgttcgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgcccgaggtgtcgctggtggcgatcctcgac
gcggacaaggaaggcttcctgcgctcggagcgctcgctgatccagaccatcggtcgtgcc
gcgcgcaacctgcacggcaaggcgatcctctacgccgacaacgtcaccggctcgatgcag
cgtgcgatcgacgagaccgagcggcgtcgggccaagcagatcgccttcaacgaagcccat
ggcatcgtgcccaagggggtgcgcaaggacatcaaggacattctcgaaggcgccgtggtg
cccggcgcgcgcggcaagcgcaagggcgtggccaaggtggcggaggagagcgggcgctac
gagaacgaactgcgctcgccgagcgagatcagcaagcgcatccgccaactggaggaaaag
atgtaccagttggcccgcgacctggagttcgaggcggcggcgcaactgcgcgacgagatc
cagacgctgcgcgagcgcctggtcaacgtctga

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