KEGG   Pseudomonas aeruginosa M18: PAM18_2682
Entry
PAM18_2682        CDS       T01973                                 
Name
(GenBank) putative transcriptional regulator
  KO
K11917  sigma-54 dependent transcriptional regulator
Organism
paf  Pseudomonas aeruginosa M18
Brite
KEGG Orthology (KO) [BR:paf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paf03000]
    PAM18_2682
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paf02044]
    PAM18_2682
Transcription factors [BR:paf03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PAM18_2682
Secretion system [BR:paf02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PAM18_2682
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase HTH_30 AAA_2 AAA_16 AAA HTH_8 bpMoxR FixP_N AAA_19 AAA_3 Sigma70_r4
Other DBs
NCBI-ProteinID: AEO75165
LinkDB
Position
2986512..2987597
AA seq 361 aa
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVAR
HIHALSGRNGGPFVAVNCGAFAESLVESELFGHEKGAFTGALQSKAGWFEAANGGTLFLD
EIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLADAVVAGHFREDLFY
RLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRE
LENAIHHALLVCRNRLIQPADLHLIDMRARQEPSGLRRAPESAAGSALEAALQALFEENR
EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVG
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtccgtcatcacccatccccacgcccgcgagctgaccaaatcggtgcgcgccaccgtg
ctggtgttcaacgacccccgttcccgcgagctgctggagcgcatcgagcgcctggcgccc
agcgaggccaacgcgctggtcatcggcgagaccggcaccggcaaggagctggtggcgcgc
catatccacgccctcagcggacgcaacggcggcccgttcgtcgcggtcaactgcggtgct
ttcgccgagagcctggtggagagcgagctgttcggtcacgagaagggcgcctttaccggt
gcgttgcagagcaaggccggctggttcgaggcagccaacggcggcaccctgttcctcgac
gagatcggcgacctgccgccgagcatccaggtcaagctgctgcgcgtgctgcaggaacgc
gaggtggtgcggctcggttcgcgccggccgatccccatcgacgtgcggctggtggcggcg
accaacgtcgacctggctgacgcggtggtcgccggacacttccgcgaggacctgttctac
cgcctgcacgtggcgaccatccaactgccgccgttgcgcgagcgccgcggcgatatcctg
ccgctggccgagtacttcatcgtcgagcactgccggcgcctcggctacaccagcgcgagc
ctgagcccggaagccgagcgcaagctgctcgggcattcctgggcgggcaatatccgcgag
ctggagaacgccatccaccacgcgctgctggtctgccgcaaccgtctgatccagccggcc
gacctgcacctcatcgacatgcgtgcgcgccaggagccgagcggcttgcgccgcgccccc
gagagcgccgccggctcggcgctggaagcggcgctgcaggcactgttcgaggaaaaccgc
gaggatctctacgagcacatcgaggaaaccgtgttccgtgccgcctatcgcttctgccac
ggcaaccagttgcagaccggacgcctgctggggatcagccgcaacatcgtgcgcgcccgc
ctggagaagatcggcgagctggaaacctcgccacggcacaacgtggtctcgctggtgggc
aagtga

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