Pseudomonas aeruginosa M18: PAM18_2796
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Entry
PAM18_2796 CDS
T01973
Symbol
pslN
Name
(GenBank) putative DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paf
Pseudomonas aeruginosa M18
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paf03032
]
PAM18_2796 (pslN)
03400 DNA repair and recombination proteins [BR:
paf03400
]
PAM18_2796 (pslN)
Enzymes [BR:
paf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PAM18_2796 (pslN)
DNA replication proteins [BR:
paf03032
]
Prokaryotic type
DNA Topoisomerases
PAM18_2796 (pslN)
DNA repair and recombination proteins [BR:
paf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAM18_2796 (pslN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEO75279
LinkDB
All DBs
Position
complement(3119124..3120125)
Genome browser
AA seq
333 aa
AA seq
DB search
MSAAPPDIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRIGDAEEIRRLDKLAIPP
AYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDADKYERLLRFGQALPRLRRHI
DAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRF
RFKGKSGIEHDVSLEHPRLARVLRRCLELPGQDLLQYLDEDGQPHRIGSHDINEYLRRHT
GEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA
YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcgccaccggatatccccgccctgcccgccggcctctgctacgtcgacgac
cgccagccgggcatccgtcgacgccggcagggcaagcgcttcgtctatttcgatgccgac
ggccagcgcatcggcgacgccgaggagatccgccggctggacaagctggccattccgccg
gcctatcgcgaggtctggatctgtcccgaccccaacggccatctccaggccaccggccgc
gacgcccgtgggcgcaagcagtaccgctaccacccgcgctggcgcgaggtacgcgatgcc
gacaagtacgagcgcctgctgcgcttcggccaggcgctgccgcggctgcgccggcacatc
gacgcccagttgcgcctgcccggcctcggtcgcgacaaggtggtggccctggcggttgcg
ctgctcgacgccaccctgatccgcgtcggcaaccaccgctacgcccgcgacaaccgctcc
tacggcctgaccaccctgcgtacccggcacgtcgacgtgaacggcagtcgcatccggttc
cgcttcaagggcaagagcggcatcgagcacgacgtcagcctggagcatccgcgcctggcg
cgggtgctgcggcgctgcctggaattgcccggccaggacctgttgcagtacctggacgag
gacggccagccgcaccgcatcggctcccacgacatcaacgagtacctgcgccggcatacc
ggcgaggatttcagcgccaaggactaccgtacctgggccggcagcgcgctggcgctggag
cgtctgcgacgtgccgaagccgacgggcttggcgcggtggtggcggaggtcgccgccgaa
ttgggcaacagcgtggcgatctgccggcaatgctacatccacccggcgatcatcgaggcc
taccaggccgggcaactgggccagctcaggcgcgcccgcaagcgccgctggctgagtgcc
gaggaagcgaccctgctggccttcctcgacacgcccggctga
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