Pseudomonas aeruginosa M18: PAM18_3033
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Entry
PAM18_3033 CDS
T01973
Symbol
liuD
Name
(GenBank) methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf00280
Valine, leucine and isoleucine degradation
paf01100
Metabolic pathways
Module
paf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PAM18_3033 (liuD)
Enzymes [BR:
paf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PAM18_3033 (liuD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
HlyD_D23
GARS_A
ATP-grasp_3
ATPgrasp_ST
LAL_C2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AEO75516
LinkDB
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Position
3383001..3384968
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AA seq
655 aa
AA seq
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MNPDYRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGA
KPVDSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMG
SKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLKAAAGGGGKGMKVVERE
AELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRR
HQKVVEEAPAPGLGVELRRAMGEAAVRAAQAIGYLGAGTVEFLLDERGQFFFMEMNTRLQ
VEHPVTEAITGLDLVAWQIRVARGEALPLTQEQVPLNGHAIEVRLYAEDPEGGFLPASGR
LALYREAPAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREEARQRLLAMLAETSVG
GLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPAPQALPEHFWQAAAEAWLQSEPG
HRRDDDPHSPWSRNDGWRSALAREADLMLRCRDERRCVRLRHASPSQYRLDGDDLVSRVD
GVTRRSAALRRGRQLFLEWEGELLAIEAVDPIAEAEAAHAHQGGLSAPMNGSIVRVLVEP
GQTVEAGTALVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDENQA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggactaccgcagcatccagcgcctcctggtcgccaaccgcggcgagatcgcc
tgccgggtgatgcgcagcgcgcgcgccctcggcatcggcagcgtcgccgtgcacagcgac
atcgaccgccacgcccgccacgtcgccgaagccgacatcgccgtcgacctgggcggcgcc
aagcccgtcgacagctacctgcgcggcgacaggatcatcgccgccgccctcgccagcggc
gcccaggcgatccaccccggctacggcttcctctcggagaacgccgacttcgcccgcgcc
tgcgaggaagccggcctgctcttcctcggaccgccggcggcggccatcgacgccatgggc
agcaagtcggccgccaaggcgctgatggaagaagccggcgtgccgctggtgcccggctat
cacggcgaagcccaggacctcgagactttccgccgggaagccgggcgcatcggctacccg
gtgctgctcaaggccgccgctggcggcggcggcaagggcatgaaggtggtggagcgcgag
gccgagctggccgaggccctttcctccgcccagcgcgaggccaaggccgccttcggcgac
gcgcggatgctggtggagaaatacctgctgaagccgcgccacgtggagatccaggtattc
gccgaccgccatggccactgcctgtacctcaacgaacgcgactgttcgatccagcgccgc
caccagaaggtcgtcgaggaagcccccgcccccggtctcggtgtggaactgcgccgggcc
atgggcgaggccgcggtacgcgcggcgcaggcgatcggctacctcggcgccggtaccgtc
gaattcctcctcgacgaacgcggccagttcttcttcatggaaatgaacacccgcctgcag
gtggaacacccggtcaccgaggccatcaccggcctcgacctggtcgcctggcagatccgc
gtcgctcgcggcgaggcgctgccgctgacacaggaacaggtgccgctgaacggccacgcc
atcgaagtgcggctctacgcggaagaccccgagggcggcttcctccccgccagcggccgc
ctggcgctgtaccgcgaagcgcccgccggccccggccggcgggtcgacagcggggtacgc
gaaggcgacgaggtctcgccgttctacgacccgatgctggccaagctgatcgcctggggc
gaaacccgcgaggaagcccgccagcgcctgctggcgatgctggcggaaacctcggtcggc
ggcctgcgcaccaacctggcgttcctccgccgcatcctcggccatccggcgttcgccgcc
gccgaactggacaccgggttcatcgcgcgccaccaagacgacctgctgccggcgccgcaa
gcgctgccggagcatttctggcaagccgccgccgaagcctggctgcagagcgaaccgggc
caccgtcgcgacgacgacccgcattcgccgtggagccgcaacgacggctggcgcagcgcc
ctggcgcgggaggccgacctgatgctgcgctgccgcgacgaacgccgctgcgtccgcctg
cgccacgccagccccagccagtatcgcctggacggcgacgacctggtcagccgggtggac
ggtgtcacccgtcgctcggcggcgttgcgccgcggacgccagttgttcctcgaatgggag
ggcgaactgctggccatcgaagccgtcgacccgatcgccgaagccgaggccgcccatgcc
caccagggtggtttgagcgcgccgatgaacggcagtatcgtgcgggtcctggtcgagccc
ggccagacggtcgaagccggcaccgccctggtggtgctggaggcgatgaagatggaacac
agcatccgcgcgccccacgccggggtagtgaaggcgctgtattgcagcgagggcgaactg
gtagaggaaggcacgccgctggtggagctggacgagaaccaggcctga
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