Pseudomonas aeruginosa M18: PAM18_3609
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Entry
PAM18_3609 CDS
T01973
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
paf
Pseudomonas aeruginosa M18
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paf03016
]
PAM18_3609 (rnd)
Enzymes [BR:
paf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PAM18_3609 (rnd)
Transfer RNA biogenesis [BR:
paf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAM18_3609 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
AEO76090
LinkDB
All DBs
Position
complement(4011446..4012570)
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AA seq
374 aa
AA seq
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MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDP
LLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMG
YSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRAW
LLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHV
LRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQASRLPQSEWPEALPEP
LPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPDGPYELPDSLRGWRR
ERMGQALLDALESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgaaatccagtggatccgcgatgatgccagcctggcgcagcaatgccgg
gaatggcgcacacagccgtacctcgcgctcgataccgagttcatgcgcgtcgataccttc
tatcccgcggccggtctggtgcaggtgggcgatggccggcaggagtggctgatcgatccg
ctgctgatccaggactggagccccttcgccgagctgctcgaagacgagcgggtggtgaag
gtgctgcatgcctgcagcgaagacctcgaggtgttcctgcgcctcaccggcagcctgccg
gtgccgctgttcgatacgcagttggccgccgcctatctcggcatggcccattcgatgggc
tactcgaagctggtgaaggaggtgctggatatcgacctgcccaaggacgagacccgttcc
gactggttgcaacggccgctcaccgagatgcagatgcgctacgccgccgacgacgtccag
cacctcgcccaggtctacctggccctggatgcgcggctgagcgaggagaaacgcgcctgg
ctgctggaggacggcgccgaactggtcgccaacctctgccgcgagagtgatccgcgcgag
gcctaccgcgaggtcaagctgggttggcggctgcgtccgcagcaactggcggtgctccgc
gaactctgcgcctggcgcgaggagcaggcacgcctgcgcaaccggccgcgcaaccacgtg
ctgcgcgaacgtaccctgtggccgctggcgcgcctgctgccgaagaacaagaccgacctg
gcggcgatcgaagacatgcatccgcgcaccgtgcgccaggacggcgacttcctcatcgaa
ctgatcgcccaggcttcgcgcctgccgcagagcgaatggcccgaggcgctgcccgagccg
ctgccgccggaggtcaccccgctgctcaagagcctgcgcgccatcggccagcgcgaagcg
gagaccctgggcatggcgcctgagctgatgctgcgcaagaagatcctcgaggcactgctc
aagagcggctatcccgacggtccctacgaactgcccgattccctccgcggctggcgccgc
gaacgcatgggccaggccctgctggacgccctggagagcgcatga
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