Pseudomonas aeruginosa M18: PAM18_3896
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Entry
PAM18_3896 CDS
T01973
Name
(GenBank) putative transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAM18_3896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paf03000
]
PAM18_3896
Transcription factors [BR:
paf03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
PAM18_3896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_10
Xre-like-HTH
HTH_28
Sigma70_ECF
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AEO76377
LinkDB
All DBs
Position
complement(4329948..4330679)
Genome browser
AA seq
243 aa
AA seq
DB search
MTDYASLLFDSVARLRKAATTEAVCREMVEFAARLGFDRVIVCSLFPRPDEDELIDELFF
VHGDWAEGRSAQERDAYLLHCPVTRHILELDEPFFWSKSPSEDPERMTYRIVRGVRDLGQ
VNGMQVPVFGRNGLEGAVSFAGERLDLNAGCKLAAQAFCPILFFALKRLRGPVSAGDAQA
LSEREREVLQWIALGKQQAEVAAILMISERTVENHLRAARRRLGAASTAQAVARALRLGD
IEV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactacgccagccttctcttcgacagcgtcgcccggctgcgcaaggccgctacc
accgaggcggtctgccgcgagatggtggagttcgccgcacgcctgggctttgaccgggtg
atcgtctgcagccttttcccccgccccgacgaggacgaactgatcgacgagctgttcttc
gtccatggcgactgggccgaagggcgcagcgcccaggagcgcgacgcctatcttctgcac
tgtccggtcacccggcacatcctcgaactggacgagccgttcttctggtcgaagagcccc
tcggaggatcccgagcgcatgacctaccgcatcgtccgtggggtccgcgacctcggccag
gtcaatggcatgcaggtgccggtgttcggccgcaacggcctggagggcgcggtgtctttc
gccggcgagcggctggacctgaatgccggttgcaagctcgccgcccaggccttctgcccg
atcctgttcttcgccctgaagcgcctgcgcggccctgtgtcggcgggcgatgcgcaagcg
ctcagcgagcgcgagcgggaagtcctgcaatggatcgccctgggcaagcagcaggcggag
gtggcggcgatcctgatgatttccgagcgcaccgtggagaatcacctgcgtgccgcccgc
cgccgtctcggcgcggcgtccaccgcccaggcggtggcgcgggcgctgcgcctgggcgat
atcgaggtctga
DBGET
integrated database retrieval system
