Pseudomonas aeruginosa M18: PAM18_3945
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Entry
PAM18_3945 CDS
T01973
Name
(GenBank) Isopropylmalate/homocitrate/citramalate synthase
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
paf
Pseudomonas aeruginosa M18
Pathway
paf00360
Phenylalanine metabolism
paf00362
Benzoate degradation
paf00622
Xylene degradation
paf01100
Metabolic pathways
paf01120
Microbial metabolism in diverse environments
paf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
PAM18_3945
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PAM18_3945
00622 Xylene degradation
PAM18_3945
00621 Dioxin degradation
PAM18_3945
Enzymes [BR:
paf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
PAM18_3945
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Radical_SAM
DUF4785_3rd
Motif
Other DBs
NCBI-ProteinID:
AEO76426
LinkDB
All DBs
Position
complement(4379016..4380632)
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AA seq
538 aa
AA seq
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MVQPLSAITSKVLDCTLRDGGYYTAWDFPTTIIERYLDAMRAARVDVVELGFRFLRNEGF
KGACAYTTDHFIRSLAIPEGLALAVMLNGADLLGEMGLEAALQQLVPESAETSALKMVRI
ACHFHEFERVLPACDWLKRRGYAVGFNLMQMAGHTREEVSRLASSASDWPVDVLYFADST
GSMKPADVCETVAWLREGWSGALGFHAHDNMGLALQNTLTARTEGVEWLDATITGMGRGP
GNVRIEELLIELAEPRANLVPLLALIGEYFAPLKVRHGWGTNAFYYLSGKHAIHPTYVQE
MLGDPRYGEEDVLAAIDYLRRQGGQSFRRDMLVSARHLYDETPKGIWSPCDWLEGREVLL
LGAGAGVVRHRQALESYIRRTRPVVVALNTQSDLDASLIDLRVACHPVRLLADCETHARL
PQPLITPVSSLPTELLMSLHDKQLLDFGLGVRSGRFEVFPQGCVAPNSLVIGYALAVAAS
GRARRILLAGFDGYPPGDSRNQDMQELFNLFCARQSVPGMVSVTETAYDIPCTSIYGM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggtccagccattgtcggcgatcaccagcaaggtgctcgactgtaccctccgtgatggt
ggctactacaccgcctgggacttccccaccacgatcatcgagcgttatctcgatgcgatg
cgtgcggcgcgggtcgacgtcgtggagctgggtttccggtttctgcgcaacgaagggttc
aagggagcctgtgcctacaccaccgaccacttcatccgcagccttgccattcccgaaggg
ttggccctggcggtgatgctcaacggcgccgaccttttgggcgagatgggcctggaggca
gcgttgcaacaactggttccagagagcgcggaaaccagcgcgctgaagatggtgcgcatc
gcctgccacttccacgagttcgagcgtgtattgcccgcgtgcgactggctgaagcgccga
ggctatgccgttggcttcaacctgatgcaaatggccggccatacccgtgaggaggtgagt
cgccttgcgtcatcggccagtgactggcccgtcgacgtgctgtacttcgccgatagcacg
ggcagcatgaagcccgcggatgtctgcgagaccgtggcctggctgcgggaaggctggtcg
ggggcgctgggttttcatgcgcacgacaacatgggcctggcgttacagaacaccctgacc
gcgcggaccgagggcgtcgaatggttggatgccaccatcaccggaatgggacgcggcccc
ggcaatgtgcgcatcgaggaactgttgatcgagcttgccgagccgcgggccaacctggtc
cccttgctggccctgatcggagaatacttcgcccctttgaaggtgcggcatggctggggg
accaacgcgttctactacctttccgggaagcatgccatccacccgacctatgtccaggaa
atgctgggcgacccgcgctatggcgaagaggacgtgcttgccgctatcgactatctacgt
cggcaaggtggacagagcttccgtcgcgacatgctcgtcagtgcccgtcatctctatgat
gaaacgccgaaagggatttggtccccatgcgactggctggaaggcagggaagtattgctg
ctgggggctggcgcaggcgtggtcaggcaccgccaggccctcgagtcctatatccggcgt
acccggccagtggtagtcgcgttgaatacccagtcggatctcgacgccagcctgattgat
ctccgcgtagcctgccatccagtacgcctgcttgcggattgcgaaacccatgcgcgcctg
ccgcagcctctcataacccctgtctcgagcctgcctaccgaattactgatgtcgttgcac
gataagcaacttctggatttcgggttgggagtgaggtccggcaggttcgaagtgttccct
cagggctgcgtcgctccgaactcactggtcatcggttatgccttggcggtggccgccagc
ggcagagcgcgacgaattctcctggccggtttcgatggctatccgccgggagactcgcgc
aaccaggatatgcaggaactgttcaatctgttctgtgcgcggcaaagcgtgcccggcatg
gtttccgtcacggagacggcttatgacattccttgcacgagtatttacggcatgtag
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