Pseudomonas aeruginosa M18: PAM18_4106
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Entry
PAM18_4106 CDS
T01973
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
paf
Pseudomonas aeruginosa M18
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paf03009
]
PAM18_4106 (rumA)
Enzymes [BR:
paf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PAM18_4106 (rumA)
Ribosome biogenesis [BR:
paf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PAM18_4106 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_23
PCMT
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AEO76587
LinkDB
All DBs
Position
complement(4535172..4536524)
Genome browser
AA seq
450 aa
AA seq
DB search
MARNKGGLRFQPSGGARGPAIPVGKKQRLTIERLAHDGRGIAHEAGMTWFVSGGLPGEEL
EARVLGARSKVVDARSERLFSSSDLRRREPCTVAGRCGGCTLQHLEHGEQLALKQRTLQE
QLQRFAGIEPEEWAAPLVGPEFGYRRRARIAVRWDARARRLDVGFRASASQEIVAFDECL
VLVPPLQTIARALPALLQDFRKPESIGHVELFHGTASALLLRHTTALVDEDRQRLAAFCS
AHQAQLWLQGAEQPLPVEPAAELGYSLGDWQLTLAYRPGDFVQVNAPVNESMIRQALDWL
APTADERVLDLFCGLGNFSLPLARRVARVVGVEGVAAMVERAGANALANGLGNAHFFQAD
LSKALAEAPWAEQGFTAVLLDPPRDGAFEAVREMSSLGARRVVYVSCNPATLARDAGEMA
RQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaataagggcgggctgcgcttccagcccagcggtggtgcgcgcggtcccgcg
ataccggtaggcaagaagcagcgcctgaccatcgagcgcctggcccatgacggccgaggt
atcgcccacgaggcggggatgacctggttcgtcagcggagggctgcctggcgaggaactt
gaggcccgggtgctgggcgcacgaagcaaggtggtcgacgcgcgcagcgagcgcctgttc
agcagtagcgacctgcgtcgccgcgagccctgcactgtagcgggtcgctgcggcggctgc
accctgcagcacctggaacacggcgagcagttggccctgaagcagcgtaccttgcaggag
cagttgcagcgtttcgccgggatcgagccggaagaatgggccgcccctctggtcgggccc
gaattcggctatcggcgccgcgctcggatcgccgtgcgctgggatgccagggcgcggcgt
ctggatgtcggcttccgtgcctcggccagccaggagatcgtcgccttcgatgagtgcctg
gtcctggtgccgcctttgcaaacgattgcccgtgccctgcctgctcttctgcaggacttc
cgcaagccggaaagcatcggccacgtggagctcttccatggcacggccagtgcattgctg
ttgcggcatacgactgccctggtcgacgaggatcgccagcgcctggccgctttctgctcc
gcacaccaggcccagctctggctgcaaggtgcggaacagcccttgccggtggagccggcc
gccgaactgggctactccttgggtgactggcaactgactctggcataccgacccggagac
ttcgtccaggtcaatgcgccggtgaacgagtcgatgatccgccaggcccttgactggctg
gcaccgaccgccgacgagcgggtcctcgacctgttctgcgggctgggcaatttctccctg
ccgctggcgcgccgggtggcgcgggtagtcggggtggagggcgtggcggcgatggtcgag
cgggcaggcgccaacgcgctggccaatggccttggcaacgcgcactttttccaggccgac
ctgtccaaagcgcttgccgaagcgccctgggcggagcaaggttttaccgctgtgctgctc
gatccgccgcgcgacggcgcgttcgaggcggtacgcgaaatgagttctctgggtgcccgg
agggtagtctatgtatcctgcaatccggcgaccctggcgcgcgatgctggcgaaatggcc
aggcagggctatcgtctgaagcgcgccggaatcctcgatatgtttccgcagaccgcacat
gtcgaggccatggctttgttcgaggcaggctag
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