Entry |
|
Symbol |
rhl
|
Name |
(GenBank) ATP-dependent RNA helicase RhlB
|
KO |
|
Organism |
pag Pseudomonas aeruginosa LESB58
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pag00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PLES_11131 (rhl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pag03019]
PLES_11131 (rhl)
Enzymes [BR:pag01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PLES_11131 (rhl)
Messenger RNA biogenesis [BR:pag03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PLES_11131 (rhl)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1207347..1208540)
|
AA seq |
397 aa
MVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKT
AAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVG
GMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQV
RQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVA
GSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTL
EGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISF
AGEDDAFALPPIEELLGRKITCEMPPAELLKPVPRKH |
NT seq |
1194 nt +upstreamnt +downstreamnt
gtggtcgaaccgcaggaaggcaagacccgcttccacgacttcaacctcgccccgagcctg
atgcacgccatccatgacctcggcttcccctactgcaccccgatccaggcgcaggtactg
ggcttcaccctgcgcggccaggacgccatcggccgcgcccagaccggcaccggcaagacc
gccgcgttcctcatctcgatcatcacccaattgctgcagaccccgccgccgaaagagcgc
tacatgggcgagccgcgcgcgctgatcatcgccccgacccgcgaactggtggtacagatc
gccaaggacgccgcggcgctgaccaagtacaccgggctgaacgtgatgaccttcgtcggc
ggcatggacttcgacaagcaactcaagcagctggaagcgcgcttctgcgacatcctggta
gccaccccaggccgtctgctggacttcaaccagcgcggcgaggtgcacctggacatggtc
gaggtgatggtcctcgacgaagccgaccgcatgctcgacatgggcttcatcccgcaggtc
cggcagatcatccggcagaccccgcacaagggcgaacgccagaccctgctgttctcggcg
accttcaccgacgacgtgatgaacctcgccaagcagtggaccgtcgatccggcgatcgtc
gagatcgagccggagaacgtcgccagcgacaccgtcgagcagcatgtctacgccgtggcc
ggcagcgacaagtacaagctgctgtacaacctggtggcacagaacaactgggaacgggtg
atggtcttcgccaaccgcaaggacgaagtccgccgcatcgaggaacgcctgaccaaggac
ggcatcagcgccgcccagatgtccggcgacgtaccgcagcacaagcgcatccgcaccctg
gaaggcttccgcgaaggcaaaatccgcgtcctggtggcaaccgacgtggccggccgcggc
atccacatcgacggcatcagccatgtgatcaacttcaccctgccggaggacccggacgac
tacgtgcaccgtatcggtcgtaccggccgcgccggcgcctcgggcacctcgatcagcttc
gccggcgaggacgatgccttcgccctgccgccgatcgaagaactgctgggccgcaagatc
acctgcgagatgccgccggccgaactgctcaagccggtaccgcgcaagcactga |