Pseudomonas aeruginosa LESB58: PLES_13951
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Entry
PLES_13951 CDS
T00818
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pag
Pseudomonas aeruginosa LESB58
Pathway
pag03030
DNA replication
pag03430
Mismatch repair
pag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PLES_13951 (dnaE)
03430 Mismatch repair
PLES_13951 (dnaE)
03440 Homologous recombination
PLES_13951 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pag03032
]
PLES_13951 (dnaE)
03400 DNA repair and recombination proteins [BR:
pag03400
]
PLES_13951 (dnaE)
Enzymes [BR:
pag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PLES_13951 (dnaE)
DNA replication proteins [BR:
pag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PLES_13951 (dnaE)
DNA repair and recombination proteins [BR:
pag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PLES_13951 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
CAW26123
LinkDB
All DBs
Position
1501626..1505147
Genome browser
AA seq
1173 aa
AA seq
DB search
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAG
IKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQRNGEIIIERDWV
KEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEH
LHAAVALASRCNAPLVATNDVRFIKQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVA
DAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQEE
MLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNIDFIPLDDKPTYSL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFP
APFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIK
GVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDEL
KAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVM
KNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKAL
LQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccttcgttcacctgcgtctgcataccgaattctccctggtcgacggcctg
gtccgggtcaagcccctggccaaggcagtggcagggctgggcatgccggcggtggcggtc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggggccgacatctggctcgccagccgcgaggaagatggcccgctc
agtcgcctgagcctgctggcgatgaacgcgaagggctatcgcaacctcaccgagctgatt
tcccgcggttggagcgaaggccagcgcaacggcgagatcatcatcgagcgcgactgggtc
aaggaggcggcggaaggcctgatcgcgctgtccgcggccaaggagggcgagatcggccac
gcgctgctcgacggcgaggaagccaaggccgaggcgctgttgcgcgagtggatggaggtg
ttccccgagcgcttctacgtggaagtgcaacgtaccagccgggtcaacgacgaggagcac
ctccacgcggcggtggctttggcgtcacgctgcaacgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggcccacgagacccgcgtctgcatcggcgag
gggcggaccctcgacgatccgcggcggccgcgtacctattcggaccagcaatacctgaag
tcgccggcggaaatggccgagctgttcagcgacctgccggaagcgttggaaaacaccgtc
gagatcgccaaacgctgcaacatcgaggtgcagctgggcaagtacttcctgccggacttc
cccacgcccaatggcatgggcatcgacgactacctgcggcacgcctccttcgaaggtctc
gaggagcgcctggaggtgctgttgccgaaggacaccccggactacgaggccaagcgccag
gtctatgtcgatcgcctgaacttcgaactcgatatcatcatccagatgggtttccccggt
tacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtaccggtaggc
cccgggcggggctcgggcgccggctcgctggtggcctacgtgctgaagatcaccgacctc
gatccgctggcctatgacctgctgttcgaacgtttcctcaacccggaacggatctccatg
cccgacttcgacgtcgacttctgcatggagggccgcgaccgggtgatcgactacgtggcc
gacgcctacgggcgcaacgcggtgagccagatcatcaccttcggcaccatggcggcgaag
gcggtggtacgcgacgtggcgcgggtccagggcaagtcctacggtctcgccgaccggctg
tcgaagatgatcccgttcgaagtcggcatgaccctggataaggcctacgagcaggaagaa
atgctccgcgacttcctcaagagcgacgaggaagccgccgagatctgggagatggccctc
aagctggaaggcatcactcgcggtaccggcaagcacgccggtggcgtggtgatcgcgccg
accaagctgaccgacttctcgccgatcgcctgcgacgaggaaggcggcggcctggtgacc
cagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggcctg
cggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaagaag
ggcctggagccggtgaacatcgacttcatcccgctggacgacaagccgacctattcgctg
ctgcagaaggccgagaccactgcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacctcatcgcactggtggcgctgttccgc
ccgggtcctctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgcgcc
gagctgtcctatccgcaccccgattaccagtacgccggcctggagccggtgctcaagccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtcatggccggc
tataccctcggtggcgcggacatgctgcgccgagcgatgggcaagaagaagcccgaggaa
atggccaagcagcgcggcggtttcatcgagggttgcaagaacaacggcatcgatgccgac
ctcgcgggcaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaagtcg
cactcggcagcctacggcctggtctcctaccagaccgcctggctgaagacccacttcccg
gcgccgttcatggccgcggtactcaccgcggatatgcagaacaccgacaaggtggtgacg
ctgatcgaagaatgccggcacatgaagctgcgcatcgtggcgccggacgtgaacaactcc
gagttccgcttcaccgtcgacgacgatggccggatcgtctatggcctgggtgcgatcaag
ggcgtcggcgaggggccggtggaggcgatcaccgaatgccgcgccgaaggcgggccgttc
aacaccctgttcgatttctgcgaccgcgtcgacctcaagcgcatcaacaagcgcaccctg
gaagcgctgatccgcgccggtgcgctggatcgcctggggccgcactaccacgacgagcta
aaggcctaccaggctaccgtcgacctcaaccgcgccgtgctgctggcggcgatggaggaa
gcgatccaggccgcggagcagaccgcgcgcagtcacgacagcgggcacatggacctgttc
ggcggagtcttcgccgagccggaggcggatgtctacgccaaccaccgcaaggtcaaggag
ctgactctcaaggaacgcctgaagggcgagaaggacaccctcggcctgtacctgaccggc
catccgatcgacgagtacgaaggcgaggtgcggcgcttcgcccgccagcgcatcgtcgag
ctgaagccggcgcgcgatacccagacggtggccgggctgatcgtcaacctgcgggtgatg
aagaacaagaagggcgacaagatgggcttcgtcaccctcgacgaccgctccggacggatc
gaggcctcgctgttctccgaagccttcgccgcggcccagtcgctgctgcagaccgatgcg
ctggtggtggtcgagggcgaggtcagccaggacgacttctccggcggactgcgcctgcgc
gccaagcgcgtgatgagcctggaggaggcgcgtaccggcctggcggagagcctgcggatg
aagctgcacgccgacctgttgaagggcgatcgcctgcgctggctgggcgagctgttcaac
cgccatcgcggttcctgcccgatcaccctggactacaccagcgccgacgccaaggccctg
ctgcagttcggcgagagctggcgggtggatccggcggacgatctgatccaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctcaattatcgttaa
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